Chemical elements
  Nickel
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    PDB 1a5n-1g2a
      1a5n
      1a5o
      1b9m
      1b9n
      1bs6
      1bs7
      1bxi
      1cc1
      1ddn
      1e0o
      1e20
      1e3d
      1e42
      1e4w
      1e6v
      1e6y
      1e9y
      1e9z
      1ef8
      1eje
      1ejr
      1ejs
      1ejt
      1eju
      1ejv
      1ejw
      1ejx
      1ek0
      1elr
      1elw
      1em0
      1f5t
      1f9z
      1fcp
      1fi1
      1fn3
      1frf
      1frv
      1fwa
      1fwb
      1fwc
      1fwd
      1fwe
      1fwf
      1fwg
      1fwh
      1fwi
      1fwj
      1g27
      1g2a
    PDB 1g3v-1mn0
    PDB 1mro-1s9b
    PDB 1scr-1xmk
    PDB 1xu1-2cg5
    PDB 2cqz-2jih
    PDB 2jk8-2v4b
    PDB 2vbq-3c2q
    PDB 3c6c-3h85
    PDB 3hdp-3kvb
    PDB 3l1m-3o00
    PDB 3o01-4ubp
    PDB 8icl-9ant

Nickel in PDB, part 1 (1-50), PDB files 1a5n - 1g2a






Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms.
PDB files 1-50 (1a5n - 1g2a):
  1. 1a5n - K217A Variant of Klebsiella Aerogenes Urease, Chemically Rescued By Formate and Nickel
  2. 1a5o - K217C Variant of Klebsiella Aerogenes Urease, Chemically Rescued By Formate and Nickel
  3. 1b9m - Regulator From Escherichia Coli
  4. 1b9n - Regulator From Escherichia Coli
  5. 1bs6 - Peptide Deformylase As NI2+ Containing Form in Complex With Tripeptide Met-Ala-Ser
  6. 1bs7 - Peptide Deformylase As NI2+ Containing Form
  7. 1bxi - Crystal Structure of the Escherichia Coli Colicin E9 Dnase Domain With Its Cognate Immunity Protein IM9
  8. 1cc1 - Crystal Structure Of A Reduced, Active Form of the Ni-Fe-Se Hydrogenase From Desulfomicrobium Baculatum
  9. 1ddn - Diphtheria Tox Repressor (C102D Mutant)/Tox Dna Operator Complex
  10. 1e0o - Crystal Structure of A Ternary FGF1-FGFR2-Heparin Complex
  11. 1e20 - The Fmn Binding Protein ATHAL3
  12. 1e3d - [Nife] Hydrogenase From Desulfovibrio Desulfuricans Atcc 27774
  13. 1e42 - BETA2-Adaptin Appendage Domain, From Clathrin Adaptor AP2
  14. 1e4w - Crossreactive Binding of A Circularized Peptide to An Anti-Tgfalpha Antibody Fab-Fragment
  15. 1e6v - Methyl-Coenzyme M Reductase From Methanopyrus Kandleri
  16. 1e6y - Methyl-Coenzyme M Reductase From Methanosarcina Barkeri
  17. 1e9y - Crystal Structure of Helicobacter Pylori Urease in Complex With Acetohydroxamic Acid
  18. 1e9z - Crystal Structure of Helicobacter Pylori Urease
  19. 1ef8 - Crystal Structure of Methylmalonyl Coa Decarboxylase
  20. 1eje - Crystal Structure of An Fmn-Binding Protein
  21. 1ejr - Crystal Structure Of the D221A Variant of Klebsiella Aerogenes Urease
  22. 1ejs - Crystal Structure Of the H219N Variant of Klebsiella Aerogenes Urease
  23. 1ejt - Crystal Structure Of the H219Q Variant of Klebsiella Aerogenes Urease
  24. 1eju - Crystal Structure Of the H320N Variant of Klebsiella Aerogenes Urease
  25. 1ejv - Crystal Structure Of the H320Q Variant of Klebsiella Aerogenes Urease
  26. 1ejw - Crystal Structure of Wild-Type Klebsiella Aerogenes Urease At 298K
  27. 1ejx - Crystal Structure of Wild-Type Klebsiella Aerogenes Urease At 100K
  28. 1ek0 - Gppnhp-Bound YPT51 At 1.48 A Resolution
  29. 1elr - Crystal Structure Of The TPR2A Domain of Hop in Complex With the HSP90 Peptide Meevd
  30. 1elw - Crystal Structure Of the TPR1 Domain of Hop in Complex With A HSC70 Peptide
  31. 1em0 - Complex of D(Cctagg) With Tetra-[N-Methyl-Pyridyl] Porphyrin
  32. 1f5t - Diphtheria Tox Repressor (C102D Mutant) Complexed With Nickel and Dtxr Consensus Binding Sequence
  33. 1f9z - Crystal Structure of the Ni(II)-Bound Glyoxalase I From Escherichia Coli
  34. 1fcp - Ferric Hydroxamate Uptake Receptor (Fhua) From E.Coli in Complex With Bound Ferrichrome-Iron
  35. 1fi1 - Fhua in Complex With Lipopolysaccharide and Rifamycin CGP4832
  36. 1fn3 - Crystal Structure of Nickel Reconstituted Hemoglobin-A Case For Permanent, T-State Hemoglobin
  37. 1frf - Crystal Structure of the Ni-Fe Hydrogenase From Desulfovibrio Fructosovorans
  38. 1frv - Crystal Structure Of the Oxidized Form of Ni-Fe Hydrogenase
  39. 1fwa - Klebsiella Aerogenes Urease, C319A Variant At pH 7.5
  40. 1fwb - Klebsiella Aerogenes Urease, C319A Variant At pH 6.5
  41. 1fwc - Klebsiella Aerogenes Urease, C319A Variant At pH 8.5
  42. 1fwd - Klebsiella Aerogenes Urease, C319A Variant At pH 9.4
  43. 1fwe - Klebsiella Aerogenes Urease, C319A Variant With Acetohydroxamic Acid (Aha) Bound
  44. 1fwf - Klebsiella Aerogenes Urease, C319D Variant
  45. 1fwg - Klebsiella Aerogenes Urease, C319S Variant
  46. 1fwh - Klebsiella Aerogenes Urease, C319Y Variant
  47. 1fwi - Klebsiella Aerogenes Urease, H134A Variant
  48. 1fwj - Klebsiella Aerogenes Urease, Native
  49. 1g27 - Crystal Structure of E.Coli Polypeptide Deformylase Complexed With the Inhibitor Bb-3497
  50. 1g2a - The Crystal Structure of E.Coli Peptide Deformylase Complexed With Actinonin


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Nickel coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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