Chemical elements
  Nickel
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    PDB 1a5n-1g2a
    PDB 1g3v-1mn0
    PDB 1mro-1s9b
    PDB 1scr-1xmk
    PDB 1xu1-2cg5
      1xu1
      1xu2
      1xx7
      1y1o
      1ynu
      1yq9
      1yqw
      1yrq
      1ysj
      1ziu
      1zle
      1znv
      1zqr
      1zrr
      1ztc
      1zvf
      1zx8
      260l
      2adw
      2afb
      2ai7
      2ai8
      2ai9
      2aia
      2aie
      2aj7
      2ap9
      2arp
      2atf
      2aw2
      2bdg
      2be6
      2bj1
      2bj7
      2bj8
      2bj9
      2bmo
      2bmq
      2bmr
      2c0n
      2c21
      2c2l
      2c5d
      2c7v
      2c9h
      2c9w
      2cad
      2caj
      2cfv
      2cg5
    PDB 2cqz-2jih
    PDB 2jk8-2v4b
    PDB 2vbq-3c2q
    PDB 3c6c-3h85
    PDB 3hdp-3kvb
    PDB 3l1m-3o00
    PDB 3o01-4ubp
    PDB 8icl-9ant

Nickel in PDB, part 5 (201-250), PDB files 1xu1 - 2cg5






Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms.
PDB files 201-250 (1xu1 - 2cg5):
  1. 1xu1 - The Crystal Structure of April Bound to Taci
  2. 1xu2 - The Crystal Structure of April Bound to Bcma
  3. 1xx7 - Conserved Hypothetical Protein From Pyrococcus Furiosus Pfu- 403030-001
  4. 1y1o - X-Ray Crystal Structure of Penicillin-Binding Protein- Related Factor A From Bacillus Stearothermophilus
  5. 1ynu - Crystal Structure of Apple Acc Synthase in Complex With L-Vinylglycine
  6. 1yq9 - Structure Of the Unready Oxidized Form of [Nife] Hydrogenase
  7. 1yqw - Structure Of the Oxidized Unready Form of Ni-Fe Hydrogenase
  8. 1yrq - Structure Of the Ready Oxidized Form of [Nife]-Hydrogenase
  9. 1ysj - Crystal Structure of Bacillus Subtilis Yxep Protein (APC1829), A Dinuclear Metal Binding Peptidase From M20 Family
  10. 1ziu - Crystal Structure of Nickel-Bound Engineered Maltose Binding Protein
  11. 1zle - Crystal Structure of A Rgd-Containing Host-Selective Toxin: Pyrenophora Tritici-Repentis Ptr Toxa
  12. 1znv - How A His-Metal Finger Endonuclease COLE7 Binds and Cleaves Dna With A Transition Metal Ion Cofactor
  13. 1zqr - Dna Polymerase Beta (E.C.2.7.7.7)/Dna Complex, Soaked in the Presence of NICL2
  14. 1zrr - Residual Dipolar Coupling Refinement of Acireductone Dioxygenase From Klebsiella
  15. 1ztc - Crystal Structure of A Putative Metallo-Beta-Lactamase (TM0894) From Thermotoga Maritima At 2.10 A Resolution
  16. 1zvf - The Crystal Structure of 3-Hydroxyanthranilate 3,4- Dioxygenase From Saccharomyces Cerevisiae
  17. 1zx8 - Crystal Structure of An Atypical Cyclophilin (Peptidylprolyl Cis-Trans Isomerase) (TM1367) From Thermotoga Maritima At 1.90 A Resolution
  18. 260l - An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme
  19. 2adw - Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad
  20. 2afb - Crystal Structure of 2-Dehydro-3- Deoxygluconokinase (Ec 2.7.1.45) (TM0067) From Thermotoga Maritima At 2.05 A Resolution
  21. 2ai7 - S.Pneumoniae Polypeptide Deformylase Complexed With Sb- 485345
  22. 2ai8 - E.Coli Polypeptide Deformylase Complexed With Sb-485343
  23. 2ai9 - S.Aureus Polypeptide Deformylase
  24. 2aia - S.Pneumoniae Pdf Complexed With Sb-543668
  25. 2aie - S.Pneumoniae Polypeptide Deformylase Complexed With Sb- 505684
  26. 2aj7 - Crystal Structure of A Putative Contractile Protein (BH3618) From Bacillus Halodurans At 1.67 A Resolution
  27. 2ap9 - Crystal Structure of Acetylglutamate Kinase From Mycobacterium Tuberculosis CDC1551
  28. 2arp - Activin A in Complex With FS12 Fragment of Follistatin
  29. 2atf - X-Ray Structure of Cysteine Dioxygenase Type I From Mus Musculus Mm.241056
  30. 2aw2 - Crystal Structure of the Human Btla-Hvem Complex
  31. 2bdg - Human Kallikrein 4 Complex With Nickel and P-Aminobenzamidine
  32. 2be6 - 2.0 A Crystal Structure of the CAV1.2 Iq Domain-Ca/Cam Complex
  33. 2bj1 - Nikr in Open Conformation and Nickel Bound to High-Affinity Sites
  34. 2bj7 - Nikr in Closed Conformation and Nickel Bound to High- Affinity Sites
  35. 2bj8 - Nikr in Closed Conformation And Nickel Bound to High and Low-Affinity Sites
  36. 2bj9 - Nikr With Bound Nickel and Phosphate
  37. 2bmo - The Crystal Structure of Nitrobenzene Dioxygenase
  38. 2bmq - The Crystal Structure of Nitrobenzene Dioxygenase in Complex With Nitrobenzene
  39. 2bmr - The Crystal Structure of Nitrobenzene Dioxygenase in Complex With 3-Nitrotoluene
  40. 2c0n - Crystal Structure of A197 From Stiv
  41. 2c21 - Specificity of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure and Biochemical Comparison With the Human Enzyme
  42. 2c2l - Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase
  43. 2c5d - Structure of A Minimal GAS6-Axl Complex
  44. 2c7v - Structure of Trypanosoma Brucei Pteridine Reductase (PTR1) in Ternary Complex With Cofactor and the Antifolate Methotrexate
  45. 2c9h - Structure of Mitochondrial Beta-Ketoacyl Synthase
  46. 2c9w - Crystal Structure of Socs-2 in Complex With Elongin-B and Elongin-C At 1.9A Resolution
  47. 2cad - Nikr From Helicobacter Pylori in Closed Trans-Conformation And Nickel Bound to 2F, 2X and 2I Sites.
  48. 2caj - Nikr From Helicobacter Pylori in Closed Trans-Conformation and Nickel Bound to 4 Intermediary Sites
  49. 2cfv - Crystal Structure of Human Protein Tyrosine Phosphatase Receptor Type J
  50. 2cg5 - Structure of Aminoadipate-Semialdehyde Dehydrogenase- Phosphopantetheinyl Transferase in Complex With Cytosolic Acyl Carrier Protein and Coenzyme A


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Nickel coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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