Chemical elements
  Nickel
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    Compounds
    PDB 1a5n-1g2a
    PDB 1g3v-1mn0
    PDB 1mro-1s9b
    PDB 1scr-1xmk
    PDB 1xu1-2cg5
    PDB 2cqz-2jih
      2cqz
      2d58
      2def
      2dro
      2drq
      2drr
      2drs
      2eaq
      2eav
      2esu
      2et2
      2etv
      2f22
      2f9m
      2fcp
      2ff2
      2fff
      2fg9
      2fj1
      2frv
      2fwe
      2g1l
      2ga0
      2ggt
      2gk2
      2glz
      2gqk
      2gql
      2gu3
      2gw3
      2gw4
      2gzx
      2h9j
      2h9k
      2hje
      2hkv
      2hza
      2hzv
      2hzy
      2i2o
      2idf
      2ilt
      2isg
      2isy
      2isz
      2it0
      2iwb
      2ixl
      2j5s
      2jih
    PDB 2jk8-2v4b
    PDB 2vbq-3c2q
    PDB 3c6c-3h85
    PDB 3hdp-3kvb
    PDB 3l1m-3o00
    PDB 3o01-4ubp
    PDB 8icl-9ant

Nickel in PDB, part 6 (251-300), PDB files 2cqz - 2jih






Experimental structures of coordination spheres of Nickel (Ni) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Nickel atoms.
PDB files 251-300 (2cqz - 2jih):
  1. 2cqz - Crystal Structure of PH0347 Protein From Pyrococcus Horikoshii OT3
  2. 2d58 - Human Microglia-Specific Protein IBA1
  3. 2def - Peptide Deformylase Catalytic Core (Residues 1-147), uc(Nmr), 20 Structures
  4. 2dro - Crystal Structure of Reducing-End-Xylose Releasing Exo-Oligoxylanase D263C Mutant
  5. 2drq - Crystal Structure of Reducing-End-Xylose Releasing Exo-Oligoxylanase D263G Mutant
  6. 2drr - Crystal Structure of Reducing-End-Xylose Releasing Exo-Oligoxylanase D263N Mutant
  7. 2drs - Crystal Structure of Reducing-End-Xylose Releasing Exo-Oligoxylanase D263S Mutant
  8. 2eaq - Crystal Structure Of Pdz Domain of KIAA0858 (Lim), MS0793 From Homo Sapiens
  9. 2eav - Crystal Structure Of the C-Terminal Peptidoglycan-Binding Domain of Human Peptidoglycan Recognition Protein Ibeta
  10. 2esu - Crystal Structure Of Asn to Gln Mutant of Winged Bean Chymotrypsin Inhibitor Protein
  11. 2et2 - Crystal Structure Of An Asn to Ala Mutant of Winged Bean Chymotrypsin Inhibitor Protein
  12. 2etv - Crystal Structure of A Putative Fe(III) Abc Transporter (TM0189) From Thermotoga Maritima MSB8 At 1.70 A Resolution
  13. 2f22 - Crystal Structure of A Putative Dna Damage-Inducable (Dinb) Protein (BH3987) From Bacillus Halodurans At 1.42 A Resolution
  14. 2f9m - 3D Structure of Active Human RAB11B Gtpase
  15. 2fcp - Ferric Hydroxamate Uptake Receptor (Fhua) From E.Coli
  16. 2ff2 - Crystal Structure of Trypanosoma Vivax Nucleoside Hydrolase Co-Crystallized With Immucillinh
  17. 2fff - Open Form of A Class A Transpeptidase Domain
  18. 2fg9 - Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.20 A Resolution
  19. 2fj1 - Crystal Structure Analysis of Tet Repressor (Class D) in Complex With 7-Chlortetracycline-Nickel(II)
  20. 2frv - Crystal Structure Of the Oxidized Form of Ni-Fe Hydrogenase
  21. 2fwe - Crystal Structure Of The C-Terminal Domain of the Electron Transfer Catalyst Dsbd (Oxidized Form)
  22. 2g1l - Crystal Structure Of the Fha Domain of Human Kinesin Family Member C
  23. 2ga0 - Variable Small Protein 1 of Borrelia Turicatae (Vspa Or VSP1)
  24. 2ggt - Crystal Structure of Human SCO1 Complexed With Nickel.
  25. 2gk2 - Crystal Structure Of the N Terminal Domain of Human CEACAM1
  26. 2glz - Crystal Structure of A Formylmethanofuran Dehydrogenase Subunit E-Like Protein (DHAF_2992) From Desulfitobacterium Hafniense Dcb-2 At 1.45 A Resolution
  27. 2gqk - Solution Structure of Human Ni(II)-SCO1
  28. 2gql - Solution Structure of Human Ni(II)-SCO1
  29. 2gu3 - Ypmb Protein From Bacillus Subtilis
  30. 2gw3 - Crystal Structure of Stony Coral Fluorescent Protein Kaede, Green Form
  31. 2gw4 - Crystal Structure of Stony Coral Fluorescent Protein Kaede, Red Form
  32. 2gzx - Crystal Structure of the Tatd Deoxyribonuclease MW0446 From Staphylococcus Aureus. Northeast Structural Genomics Consortium Target ZR237.
  33. 2h9j - Structure of Hen Egg White Lysozyme Soaked With NI2- Xylylbicyclam
  34. 2h9k - Structure of Hen Egg White Lysozyme Soaked With Ni-Cyclam
  35. 2hje - Crystal Structure of Vibrio Harveyi Luxq Periplasmic Domain
  36. 2hkv - Crystal Structure Of A Putative Member of the Dinb Family (EXIG_1237) From Exiguobacterium Sibiricum 255-15 At 1.70 A Resolution
  37. 2hza - Nickel-Bound Full-Length Escherichia Coli Nikr
  38. 2hzv - Nikr-Operator Dna Complex
  39. 2hzy - Mouse Fumarylacetoacetate Hydrolase Complexes With A Transition-State Mimic of the Complete Substrate
  40. 2i2o - Crystal Structure of An EIF4G-Like Protein From Danio Rerio
  41. 2idf - P. Aeruginosa Azurin N42C/M64E Double Mutant, Bmme-Linked Dimer
  42. 2ilt - Human 11-Beta-Hydroxysteroid Dehydrogenase (HSD1) With Nadp and Adamantane Sulfone Inhibitor
  43. 2isg - Botulinum Neurotoxin A Light Chain Wt Crystal Form B
  44. 2isy - Crystal Structure of the Nickel-Activated Two-Domain Iron- Dependent Regulator (Ider)
  45. 2isz - Crystal Structure of A Two-Domain Ider-Dna Complex Crystal Form I
  46. 2it0 - Crystal Structure of A Two-Domain Ider-Dna Complex Crystal Form II
  47. 2iwb - MECR1 Unbound Extracellular Antibiotic-Sensor Domain.
  48. 2ixl - Rmlc S. Suis With Dtdp-Rhamnose
  49. 2j5s - Structural of Abdh, A Beta-Diketone Hydrolase From the Cyanobacterium Anabaena Sp. Pcc 7120 Bound to (S)-3- Oxocyclohexyl Acetic Acid
  50. 2jih - Crystal Structure of Human Adamts-1 Catalytic Domain and Cysteine-Rich Domain (Complex-Form)


Acknowledgement

We would like to acknowledge that these pictures of PDB structures of Nickel coordination spheres were produced with valuable advice from our colleagues from http://3dpdb.com.
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