Nickel in PDB 8zak: Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+

The structure of Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+, PDB code: 8zak was solved by S.Y.Ahn, S.I.Yoon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.26 / 2.40
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	95.742, 95.742, 110.905, 90, 90, 90
R / Rfree (%)	19.9 / 24.4

The binding sites of Nickel atom in the Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+ (pdb code 8zak). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+, PDB code: 8zak:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni301 b:73.8 occ:1.00 OD2 A:ASP220 2.3 59.0 1.0 CG A:ASP220 3.2 58.7 1.0 OD1 A:ASP220 3.4 58.6 1.0 OD1 A:ASP222 3.6 89.0 1.0 OD1 A:ASP142 3.6 51.8 1.0 OD2 A:ASP142 3.9 53.3 1.0 CG A:ASP142 4.2 49.1 1.0 CB A:ASP222 4.3 70.2 1.0 CG A:ASP222 4.4 83.3 1.0 CB A:ASP220 4.6 56.1 1.0 CB A:GLU138 5.0 59.5 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the Channel Protein Cora From Campylobacter Jejuni in Complex with NI2+ within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni301 b:81.7 occ:1.00 OD2 B:ASP220 2.7 53.6 1.0 CG B:ASP220 3.5 52.7 1.0 OD1 B:ASP220 3.6 54.2 1.0 OD1 B:ASP142 3.8 52.9 1.0 OD2 B:ASP142 3.8 54.0 1.0 CG B:ASP142 4.2 51.8 1.0 CB B:GLU138 4.5 65.9 1.0 CG B:GLU138 4.5 73.9 1.0 OD2 B:ASP222 4.7 68.2 1.0 CB B:ASP220 4.9 48.5 1.0 CB B:ASP222 4.9 53.4 1.0

S.Y.Ahn, S.J.Lee, S.I.Yoon. Structural and Biochemical Analysis of the Unique Interactions of the Campylobacter Jejuni Cora Channel Protein with Divalent Cations. Biochem.Biophys.Res.Commun. V. 723 50166 2024.
ISSN: ESSN 1090-2104
PubMed: 38810321
DOI: 10.1016/J.BBRC.2024.150166