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Nickel in PDB 1gnu: Gaba(A) Receptor Associated Protein Gabarap

Protein crystallography data

The structure of Gaba(A) Receptor Associated Protein Gabarap, PDB code: 1gnu was solved by D.Knight, R.Harris, S.Moss, P.C.Driscoll, N.H.Keep, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.89 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 30.013, 55.124, 64.418, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 23

Nickel Binding Sites:

The binding sites of Nickel atom in the Gaba(A) Receptor Associated Protein Gabarap (pdb code 1gnu). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Gaba(A) Receptor Associated Protein Gabarap, PDB code: 1gnu:

Nickel binding site 1 out of 1 in 1gnu

Go back to Nickel Binding Sites List in 1gnu
Nickel binding site 1 out of 1 in the Gaba(A) Receptor Associated Protein Gabarap


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Gaba(A) Receptor Associated Protein Gabarap within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni200

b:31.8
occ:1.00
O A:HOH2061 1.9 27.6 1.0
NE2 A:HIS69 1.9 19.7 1.0
O A:HOH2059 2.1 34.1 1.0
O A:HOH2062 2.3 31.4 1.0
CE1 A:HIS69 2.6 21.8 1.0
CD2 A:HIS69 3.1 23.8 1.0
ND1 A:HIS69 3.9 21.8 1.0
O A:HOH2060 4.0 44.8 1.0
CG A:HIS69 4.1 19.9 1.0
O A:ARG67 4.6 15.1 1.0

Reference:

D.Knight, R.Harris, M.Mcalister, J.Phelan, S.Geddes, S.Moss, P.C.Driscoll, N.H.Keep. The X-Ray Crystal Structure and Putative Ligand-Derived Peptide Binding Properties of Gamma-Aminobutyric Acid Receptor Type A Receptor-Associated Protein J.Biol.Chem. V. 277 5556 2002.
ISSN: ISSN 0021-9258
PubMed: 11729197
DOI: 10.1074/JBC.M109753200
Page generated: Fri Sep 25 07:53:39 2020
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