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Nickel in PDB 1qfg: E. Coli Ferric Hydroxamate Receptor (Fhua)

Protein crystallography data

The structure of E. Coli Ferric Hydroxamate Receptor (Fhua), PDB code: 1qfg was solved by A.D.Ferguson, W.Welte, E.Hofmann, B.Lindner, O.Holst, J.W.Coulton, K.Diederichs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.30 / 2.50
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 171.550, 171.550, 87.650, 90.00, 90.00, 120.00
R / Rfree (%) 22.1 / 27.1

Nickel Binding Sites:

The binding sites of Nickel atom in the E. Coli Ferric Hydroxamate Receptor (Fhua) (pdb code 1qfg). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the E. Coli Ferric Hydroxamate Receptor (Fhua), PDB code: 1qfg:

Nickel binding site 1 out of 1 in 1qfg

Go back to Nickel Binding Sites List in 1qfg
Nickel binding site 1 out of 1 in the E. Coli Ferric Hydroxamate Receptor (Fhua)


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of E. Coli Ferric Hydroxamate Receptor (Fhua) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni1030

b:95.7
occ:1.00
O3 A:PO42005 2.1 69.6 1.0
O4 A:PO42005 2.7 68.0 1.0
P A:PO42005 2.8 88.6 1.0
O4 A:GMH1005 3.6 80.9 1.0
O2 A:PO42005 4.2 83.2 1.0
C4 A:GMH1005 4.2 77.2 1.0
O5 A:GLC1006 4.3 85.9 1.0
C3 A:GMH1005 4.4 70.2 1.0
C1 A:GLC1006 4.4 76.1 1.0
O2 A:GLA1008 4.8 99.2 1.0
O3 A:GMH1005 4.9 67.6 1.0

Reference:

A.D.Ferguson, W.Welte, E.Hofmann, B.Lindner, O.Holst, J.W.Coulton, K.Diederichs. A Conserved Structural Motif For Lipopolysaccharide Recognition By Procaryotic and Eucaryotic Proteins. Structure Fold.Des. V. 8 585 2000.
ISSN: ISSN 0969-2126
PubMed: 10873859
DOI: 10.1016/S0969-2126(00)00143-X
Page generated: Fri Sep 25 08:00:11 2020
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