Nickel in PDB 1su7: Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State

Enzymatic activity of Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State

All present enzymatic activity of Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State:
1.2.99.2;

Protein crystallography data

The structure of Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State, PDB code: 1su7 was solved by H.Dobbek, V.Svetlitchnyi, J.Liss, O.Meyer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	8.00 / 1.12
*Space group*	C 1 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	111.616, 73.825, 70.832, 90.00, 111.17, 90.00
*R / R_free (%)*	13.8 / 20.7

Other elements in 1su7:

The structure of Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State also contains other interesting chemical elements:

Iron

(Fe)

11 atoms

Nickel Binding Sites:

The binding sites of Nickel atom in the Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State (pdb code 1su7). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State, PDB code: 1su7:

Nickel binding site 1 out of 1 in 1su7

Go back to

Nickel Binding Sites List in 1su7

Nickel binding site 1 out of 1 in the Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State

Mono view

Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Carbon Monoxide Dehydrogenase From Carboxydothermus Hydrogenoformans- Dtt Reduced State within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Ni639 b:12.4 occ:0.93	NI1	A:NFS639	0.0	12.4	0.9
	S2	A:NFS639	2.2	15.7	0.8
	S3	A:NFS639	2.2	12.6	0.9
	O	A:HOH1436	2.3	34.8	1.0
	S5	A:NFS639	2.3	13.4	1.0
	SG	A:CYS526	2.3	14.8	1.0
	FE3	A:NFS639	2.8	10.0	1.0
	FE1	A:NFS639	2.8	12.6	0.9
	FE4	A:NFS639	3.3	10.4	0.9
	CB	A:CYS526	3.4	10.2	1.0
	S1	A:NFS639	3.7	15.5	1.0
	FE2	A:NFS639	3.7	10.1	0.7
	SG	A:CYS295	4.3	11.7	1.0
	NZ	A:LYS563	4.5	11.4	1.0
	S4	A:NFS639	4.6	12.3	1.0
	SG	A:CYS446	4.6	9.4	1.0
	NE2	A:HIS261	4.7	11.6	1.0
	CA	A:GLY445	4.7	8.2	1.0
	O	A:HOH736	4.7	10.5	1.0
	CA	A:CYS526	4.8	8.5	1.0
	CE	A:LYS563	4.8	9.4	1.0
	C	A:GLY445	5.0	7.3	1.0

Reference:

H.Dobbek, V.Svetlitchnyi, J.Liss, O.Meyer. Carbon Monoxide Induced Decomposition of the Active Site [Ni-4FE-5S] Cluster of Co Dehydrogenase J.Am.Chem.Soc. V. 126 5382 2004.
ISSN: ISSN 0002-7863
PubMed: 15113209
DOI: 10.1021/JA037776V

Page generated: Wed Dec 16 01:15:13 2020

Last articles

Zn in 7L0B
Zn in 7KZZ
Zn in 7KZL
Zn in 7L3O
Zn in 7L52
Zn in 7L6T
Zn in 7KZ7
Zn in 7L6R
Zn in 7KKM
Zn in 7KKQ

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy