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Nickel in PDB 1u5z: The Crystal Structure of Murine April, pH 8.5

Protein crystallography data

The structure of The Crystal Structure of Murine April, pH 8.5, PDB code: 1u5z was solved by H.J.Wallweber, D.M.Compaan, M.A.Starovasnik, S.G.Hymowitz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.11 / 2.40
Space group I 2 3
Cell size a, b, c (Å), α, β, γ (°) 92.166, 92.166, 92.166, 90.00, 90.00, 90.00
R / Rfree (%) 21.9 / 26.5

Nickel Binding Sites:

The binding sites of Nickel atom in the The Crystal Structure of Murine April, pH 8.5 (pdb code 1u5z). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the The Crystal Structure of Murine April, pH 8.5, PDB code: 1u5z:

Nickel binding site 1 out of 1 in 1u5z

Go back to Nickel Binding Sites List in 1u5z
Nickel binding site 1 out of 1 in the The Crystal Structure of Murine April, pH 8.5


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of The Crystal Structure of Murine April, pH 8.5 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni101

b:92.9
occ:0.33
NE2 A:HIS106 2.9 48.4 1.0
CD2 A:HIS106 3.8 46.9 1.0
CE1 A:HIS106 3.8 45.0 1.0
O A:HOH1 4.0 26.0 0.3
ND1 A:HIS106 4.9 45.3 1.0
CG A:HIS106 4.9 44.7 1.0

Reference:

H.J.Wallweber, D.M.Compaan, M.A.Starovasnik, S.G.Hymowitz. The Crystal Structure of A Proliferation-Inducing Ligand, April. J.Mol.Biol. V. 343 283 2004.
ISSN: ISSN 0022-2836
PubMed: 15451660
DOI: 10.1016/J.JMB.2004.08.040
Page generated: Fri Sep 25 08:02:10 2020
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