Nickel in the structure of Crystal Structure of An Atypical Cyclophilin (Peptidylprolyl Cis-Trans Isomerase) (TM1367) From Thermotoga Maritima At 1.90 A Resolution (pdb 1zx8)

The binding sites of Nickel atom in the structure of Crystal Structure of An Atypical Cyclophilin (Peptidylprolyl Cis-Trans Isomerase) (TM1367) From Thermotoga Maritima At 1.90 A Resolution (pdb code 1zx8). This binding sites where shown with 5.0 Angstroms radius around Nickel atom. The 1zx8 structure was solved by JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG), with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 29.1-1.9 Space group P21212 a (A) 77.083 b (A) 132.875 c (A) 41.319 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 16.6 Rfree (%) 21 Nickel Binding Sites: Nickel binding site 1 out of 1 in 1zx8 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Nickel in the PDB 1zx8. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Nickel atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: His-1, C: Hoh134, C: Hoh160, conact list: Atom Atom Distance (A) Ni NE2 C:His-1 2.35 Ni ND1 C:His-1 4.39 Ni CD2 C:His-1 3.34 Ni CE1 C:His-1 3.26 Ni CG C:His-1 4.45 Ni O C:Hoh134 2.36 Ni O C:Hoh160 2.44 interactive model: