Nickel in PDB 2adw: Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad

The structure of Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad, PDB code: 2adw was solved by J.A.Cuesta-Seijo, G.M.Sheldrick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.60
Space group	P 42 21 2
Cell size a, b, c (Å), α, β, γ (°)	80.904, 80.904, 48.194, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 22.1

The structure of Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Nickel atom in the Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad (pdb code 2adw). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad, PDB code: 2adw:

Nickel binding site 1 out of 1 in the Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Strucutre of Echinomycin-(Acgtacgt)2 Solved By Sad within 5.0Å range: probe atom residue distance (Å) B Occ E:Ni400 b:19.9 occ:0.50 ZN E:ZN401 0.0 19.9 0.5 O E:HOH2033 2.0 21.2 1.0 N7 E:DG207 2.1 21.7 1.0 O E:HOH2035 2.1 20.4 1.0 O E:HOH2032 2.1 22.7 1.0 O E:HOH2034 2.1 19.9 1.0 C8 E:DG207 3.0 22.2 1.0 H8 E:DG207 3.1 26.6 1.0 C5 E:DG207 3.2 21.4 1.0 O6 E:DG207 3.7 21.8 1.0 C6 E:DG207 3.8 21.5 1.0 O E:HOH2024 4.1 28.4 1.0 O E:HOH2027 4.2 30.7 1.0 N9 E:DG207 4.2 22.5 1.0 C4 E:DG207 4.4 21.7 1.0 H3 J:QUI9 4.4 26.2 1.0 N4 J:QUI9 4.5 21.9 1.0 H2' E:DC206 4.8 33.7 1.0 C3 J:QUI9 4.8 21.9 1.0

J.A.Cuesta-Seijo, M.S.Weiss, G.M.Sheldrick. Serendipitous Sad Phasing of An Echinomycin-(Acgtacgt)2 Bisintercalation Complex. Acta Crystallogr.,Sect.D V. 62 417 2006.
ISSN: ISSN 0907-4449
PubMed: 16552143
DOI: 10.1107/S0907444906003763