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Nickel in PDB 2c2l: Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase

Protein crystallography data

The structure of Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase, PDB code: 2c2l was solved by M.Zhang, S.M.Roe, L.H.Pearl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 3.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.042, 204.406, 144.709, 90.00, 90.75, 90.00
R / Rfree (%) 24.8 / 28.6

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase (pdb code 2c2l). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 4 binding sites of Nickel where determined in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase, PDB code: 2c2l:
Jump to Nickel binding site number: 1; 2; 3; 4;

Nickel binding site 1 out of 4 in 2c2l

Go back to Nickel Binding Sites List in 2c2l
Nickel binding site 1 out of 4 in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ni1307

b:0.0
occ:1.00
NI B:NI1308 4.8 0.0 1.0

Nickel binding site 2 out of 4 in 2c2l

Go back to Nickel Binding Sites List in 2c2l
Nickel binding site 2 out of 4 in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ni1308

b:0.0
occ:1.00
NI B:NI1309 4.4 0.0 1.0
NI B:NI1307 4.8 0.0 1.0

Nickel binding site 3 out of 4 in 2c2l

Go back to Nickel Binding Sites List in 2c2l
Nickel binding site 3 out of 4 in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 3 of Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ni1309

b:0.0
occ:1.00
NI B:NI1308 4.4 0.0 1.0

Nickel binding site 4 out of 4 in 2c2l

Go back to Nickel Binding Sites List in 2c2l
Nickel binding site 4 out of 4 in the Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 4 of Crystal Structure of the Chip U-Box E3 Ubiquitin Ligase within 5.0Å range:

Reference:

M.Zhang, M.Windheim, S.M.Roe, M.Peggie, P.Cohen, C.Prodromou, L.H.Pearl. Chaperoned Ubiquitylation-Crystal Structures of the Chip U Box E3 Ubiquitin Ligase and A Chip-UBC13-UEV1A Complex Mol.Cell V. 20 525 2005.
ISSN: ISSN 1097-2765
PubMed: 16307917
DOI: 10.1016/J.MOLCEL.2005.09.023
Page generated: Wed Dec 16 01:17:39 2020

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