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Nickel in PDB 2frv: Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Enzymatic activity of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
All present enzymatic activity of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase:
1.18.99.1;
1.18.99.1;
Protein crystallography data
The structure of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase, PDB code: 2frv
was solved by
A.Volbeda,
M.Frey,
J.C.Fontecilla-Camps,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 8.00 / 2.54 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 112.780, 113.160, 133.910, 90.03, 90.02, 119.99 |
| R / Rfree (%) | 22.4 / 23.9 |
Other elements in 2frv:
The structure of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase also contains other interesting chemical elements:
| Magnesium | (Mg) | 6 atoms |
| Iron | (Fe) | 72 atoms |
Nickel Binding Sites:
The binding sites of Nickel atom in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
(pdb code 2frv). This binding sites where shown within
5.0 Angstroms radius around Nickel atom.
In total 6 binding sites of Nickel where determined in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase, PDB code: 2frv:
Jump to Nickel binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Nickel where determined in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase, PDB code: 2frv:
Jump to Nickel binding site number: 1; 2; 3; 4; 5; 6;
Nickel binding site 1 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 1 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 1 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Nickel binding site 2 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 2 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 2 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Nickel binding site 3 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 3 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 3 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Nickel binding site 4 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 4 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 4 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Nickel binding site 5 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 5 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 5 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Nickel binding site 6 out of 6 in 2frv
Go back to
Nickel Binding Sites List in 2frv
Nickel binding site 6 out
of 6 in the Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 6 of Crystal Structure of the Oxidized Form of Ni-Fe Hydrogenase within 5.0Å range:
|
Reference:
A.Volbeda,
E.Garcin,
C.Piras,
A.L.De Lacey,
V.M.Fernandez,
E.C.Hatchikian,
M.Frey,
J.C.Fontecilla-Camps.
Structure of the [Nife] Hydrogenase Active Site: Evidence For Biologically Uncommon Fe Ligands J.Am.Chem.Soc. V. 118 12989 1996.
ISSN: ISSN 0002-7863
Page generated: Wed Dec 16 01:18:14 2020
ISSN: ISSN 0002-7863
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