Nickel in PDB 2o8q: Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution

The structure of Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution, PDB code: 2o8q was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.68 / 1.55
Space group	P 42 21 2
Cell size a, b, c (Å), α, β, γ (°)	102.255, 102.255, 74.746, 90.00, 90.00, 90.00
R / Rfree (%)	17 / 19.1

The binding sites of Nickel atom in the Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution (pdb code 2o8q). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution, PDB code: 2o8q:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni300 b:18.2 occ:1.00 NE2 A:HIS60 2.1 17.9 1.0 NE2 A:HIS58 2.1 18.4 1.0 O A:HOH377 2.1 17.8 1.0 NE2 A:HIS100 2.1 19.7 1.0 O A:HOH346 2.1 19.7 1.0 O A:HOH340 2.2 23.0 1.0 CE1 A:HIS60 3.0 18.2 1.0 CD2 A:HIS58 3.1 18.3 1.0 CE1 A:HIS58 3.1 19.8 1.0 CE1 A:HIS100 3.1 18.0 1.0 CD2 A:HIS100 3.1 19.0 1.0 CD2 A:HIS60 3.2 21.4 1.0 O A:HOH402 3.8 45.2 1.0 O A:HOH350 3.8 23.3 1.0 O A:HOH342 4.0 21.2 1.0 ND1 A:HIS60 4.1 20.4 1.0 ND1 A:HIS58 4.2 18.3 1.0 ND1 A:HIS100 4.2 18.2 1.0 CG A:HIS58 4.2 19.3 1.0 CG A:HIS60 4.2 18.1 1.0 CG A:HIS100 4.2 17.8 1.0 OE1 A:GLN94 4.5 23.6 1.0 O2 A:EDO301 4.6 51.4 1.0 O A:HOH359 4.6 34.9 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of A Protein with A Cupin-Like Fold and Unknown Function (BXE_C0505) From Burkholderia Xenovorans LB400 at 1.55 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni300 b:16.9 occ:1.00 NE2 B:HIS58 2.1 16.8 1.0 NE2 B:HIS60 2.1 18.5 1.0 O B:HOH413 2.1 19.2 1.0 NE2 B:HIS100 2.1 19.1 1.0 O B:HOH362 2.2 20.7 1.0 O B:HOH393 2.2 16.6 1.0 CE1 B:HIS60 3.0 16.8 1.0 CD2 B:HIS58 3.1 17.8 1.0 CE1 B:HIS58 3.1 21.1 1.0 CD2 B:HIS100 3.1 19.0 1.0 CE1 B:HIS100 3.1 21.7 1.0 CD2 B:HIS60 3.1 19.4 1.0 O B:HOH352 3.9 24.6 1.0 O B:HOH344 3.9 19.3 1.0 O B:HOH368 4.0 33.7 1.0 O B:HOH423 4.0 63.0 1.0 ND1 B:HIS60 4.2 18.8 1.0 ND1 B:HIS58 4.2 17.9 1.0 ND1 B:HIS100 4.2 19.4 1.0 CG B:HIS58 4.2 18.3 1.0 CG B:HIS60 4.2 18.2 1.0 CG B:HIS100 4.2 17.2 1.0 OE1 B:GLN94 4.5 22.6 1.0 O B:HOH364 4.6 29.4 1.0 O1 B:EDO301 4.9 51.7 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.