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Nickel in PDB 2ou6: Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution, PDB code: 2ou6 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 125.00 / 1.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 57.933, 57.933, 250.773, 90.00, 90.00, 120.00
R / Rfree (%) 15.5 / 18.8

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution (pdb code 2ou6). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution, PDB code: 2ou6:

Nickel binding site 1 out of 1 in 2ou6

Go back to Nickel Binding Sites List in 2ou6
Nickel binding site 1 out of 1 in the Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of A Putative Metalloenzyme of the DUF664 Family (DR_1065) From Deinococcus Radiodurans at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni300

b:16.5
occ:1.00
NE2 A:HIS172 2.1 15.8 1.0
OD2 A:ASP168 2.1 21.2 1.0
NE2 A:HIS76 2.1 18.5 1.0
O A:HOH436 2.2 21.3 1.0
O A:HOH403 2.2 23.4 1.0
O A:HOH449 2.4 25.0 1.0
CG A:ASP168 2.9 23.9 1.0
CD2 A:HIS172 3.0 17.6 1.0
CE1 A:HIS76 3.0 14.2 1.0
CD2 A:HIS76 3.1 18.7 1.0
CE1 A:HIS172 3.1 16.0 1.0
OD1 A:ASP168 3.1 25.0 1.0
O A:HOH369 4.1 21.4 1.0
ND1 A:HIS76 4.1 16.6 1.0
CG A:HIS172 4.2 14.1 1.0
ND1 A:HIS172 4.2 15.9 1.0
CG A:HIS76 4.2 16.4 1.0
O3 A:SO4302 4.3 31.1 1.0
CB A:ASP168 4.4 17.8 1.0
CE A:MSE108 4.5 29.9 1.0
O A:HOH411 4.6 29.6 1.0
O1 A:SO4302 4.7 26.6 1.0
CG2 A:VAL80 4.7 21.9 1.0
OD1 A:ASN171 4.8 25.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
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