Nickel in PDB 2qe9: Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution

The structure of Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution, PDB code: 2qe9 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.76 / 1.90
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	53.184, 53.184, 251.364, 90.00, 90.00, 90.00
R / Rfree (%)	18.5 / 22.6

The binding sites of Nickel atom in the Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution (pdb code 2qe9). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution, PDB code: 2qe9:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni200 b:29.0 occ:1.00 O1 A:CIT201 2.1 31.0 1.0 NE2 A:HIS44 2.1 32.4 1.0 O5 A:CIT201 2.2 35.9 1.0 NE2 A:HIS128 2.2 38.4 1.0 O7 A:CIT201 2.2 35.7 1.0 NE2 A:HIS124 2.2 37.0 1.0 C6 A:CIT201 2.9 41.1 1.0 C3 A:CIT201 2.9 44.8 1.0 CD2 A:HIS44 3.0 35.5 1.0 CD2 A:HIS124 3.1 40.3 1.0 C1 A:CIT201 3.1 45.3 1.0 CE1 A:HIS44 3.1 32.2 1.0 CD2 A:HIS128 3.1 40.4 1.0 CE1 A:HIS124 3.2 37.5 1.0 CE1 A:HIS128 3.2 41.0 1.0 C2 A:CIT201 3.6 46.2 1.0 O A:HOH300 4.0 48.1 1.0 O6 A:CIT201 4.1 49.2 1.0 O4 A:CIT201 4.1 58.4 1.0 CG A:HIS124 4.2 34.5 1.0 ND1 A:HIS124 4.2 35.8 1.0 CG A:HIS44 4.2 35.6 1.0 ND1 A:HIS44 4.2 34.1 1.0 O2 A:CIT201 4.2 50.8 1.0 ND1 A:HIS128 4.3 34.6 1.0 CG A:HIS128 4.3 33.4 1.0 C4 A:CIT201 4.3 55.9 1.0 C5 A:CIT201 4.7 59.5 1.0 O A:HOH274 4.9 49.3 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of A Putative Metal-Dependent Hydrolase (Yiza, BSU10800) From Bacillus Subtilis at 1.90 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni200 b:25.5 occ:1.00 NE2 B:HIS44 2.1 33.3 1.0 O1 B:CIT201 2.1 25.8 1.0 NE2 B:HIS128 2.1 35.4 1.0 NE2 B:HIS124 2.1 35.6 1.0 O7 B:CIT201 2.1 28.9 1.0 O5 B:CIT201 2.2 25.3 1.0 C6 B:CIT201 2.9 39.4 1.0 C3 B:CIT201 3.0 38.1 1.0 CD2 B:HIS44 3.0 39.9 1.0 CD2 B:HIS124 3.1 36.4 1.0 CE1 B:HIS128 3.1 36.6 1.0 CE1 B:HIS124 3.1 38.6 1.0 C1 B:CIT201 3.1 38.8 1.0 CD2 B:HIS128 3.1 36.3 1.0 CE1 B:HIS44 3.1 39.9 1.0 C2 B:CIT201 3.5 38.7 1.0 O6 B:CIT201 4.1 39.6 1.0 ND1 B:HIS124 4.2 35.4 1.0 O4 B:CIT201 4.2 41.9 1.0 CG B:HIS124 4.2 36.1 1.0 ND1 B:HIS128 4.2 32.2 1.0 CG B:HIS44 4.2 36.1 1.0 O2 B:CIT201 4.2 37.1 1.0 ND1 B:HIS44 4.2 33.2 1.0 CG B:HIS128 4.2 31.3 1.0 C4 B:CIT201 4.3 42.4 1.0 C5 B:CIT201 4.7 50.2 1.0 CG2 B:VAL48 5.0 37.3 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.