Chemical elements
  Nickel
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    Compounds
    PDB 1a5n-1g2a
    PDB 1g3v-1mn0
    PDB 1mro-1s9b
    PDB 1scr-1xmk
    PDB 1xu1-2cg5
    PDB 2cqz-2jih
    PDB 2jk8-2v4b
      2jk8
      2kau
      2kkd
      2noo
      2nqc
      2nz6
      2o3b
      2o8q
      2o97
      2ok3
      2oq6
      2oq7
      2os0
      2os1
      2os2
      2ot7
      2ou6
      2ox0
      2p0u
      2pos
      2pr0
      2pw8
      2q4s
      2q8c
      2q8d
      2q8e
      2qe9
      2qj3
      2qjv
      2qnk
      2qq9
      2qqa
      2qqb
      2qqh
      2qyi
      2r36
      2r9z
      2rab
      2rd9
      2rj2
      2tdx
      2ubp
      2uu8
      2uuh
      2uui
      2uve
      2uvf
      2uwj
      2v24
      2v4b
    PDB 2vbq-3c2q
    PDB 3c6c-3h85
    PDB 3hdp-3kvb
    PDB 3l1m-3o00
    PDB 3o01-4ubp
    PDB 8icl-9ant

Nickel in the structure of Crystal Structure of Human Leukotriene C4 Synthase in Complex With Substrate Glutathione (pdb 2uuh)






The binding sites of Nickel atom in the structure of Crystal Structure of Human Leukotriene C4 Synthase in Complex With Substrate Glutathione (pdb code 2uuh). This binding sites where shown with 5.0 Angstroms radius around Nickel atom.
The 2uuh structure was solved by D.MARTINEZ MOLINA, A.WETTERHOLM, A.KOHL, A.A.MCCARTHY, D.NIEGOWSKI, E.OHLSON, T.HAMMARBERG, S.ESHAGHI, J.Z.HAEGGSTROM, P.NORDLUND, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)49.0-2.1
Space groupF23
a (A)169.940
b (A)169.940
c (A)169.940
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)18.3
Rfree (%)22


Nickel Binding Sites:

Nickel binding site 1 out of 2 in 2uuh


Nickel binding site 1 out of 2 in 2uuh
Click to enlarge
stereopicture of Nickel binding site 1 out of 2 in 2uuh
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Nickel in the PDB 2uuh. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Nickel atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His-4, A: His-2,

conact list:


AtomAtomDistance (A)
NiNE2 A:His-42.81
NiND1 A:His-44.90
NiCD2 A:His-43.24
NiCE1 A:His-44.03
NiCG A:His-44.55
NiNE2 A:His-22.29
NiND1 A:His-24.39
NiCD2 A:His-23.20
NiCE1 A:His-23.31
NiCG A:His-24.37

interactive model:


Nickel binding site 2 out of 2 in 2uuh


Nickel binding site 2 out of 2 in 2uuh
Click to enlarge
stereopicture of Nickel binding site 2 out of 2 in 2uuh
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Nickel in the PDB 2uuh. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Nickel atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: His-1, A: His1,

conact list:


AtomAtomDistance (A)
NiNE2 A:His-12.18
NiND1 A:His-14.26
NiCD2 A:His-13.17
NiCE1 A:His-13.14
NiCG A:His-14.30
NiNE2 A:His12.24
NiND1 A:His14.33
NiCD2 A:His13.20
NiCE1 A:His13.23
NiCG A:His14.36

interactive model:




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