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Nickel in PDB 2vuw: Structure of Human Haspin Kinase Domain

Enzymatic activity of Structure of Human Haspin Kinase Domain

All present enzymatic activity of Structure of Human Haspin Kinase Domain:
2.7.11.1;

Protein crystallography data

The structure of Structure of Human Haspin Kinase Domain, PDB code: 2vuw was solved by J.Eswaran, J.W.Murray, P.Filippakopoulos, M.Soundararajan, A.C.W.Pike, F.Von Delft, S.Picaud, T.Keates, O.King, M.Wickstroem, C.Bountra, A.M.Edwards, C.H.Arrowsmith, O.Fedorov, N.Burgess-Brown, J.Bray, S.Knapp, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.45 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.661, 78.775, 79.860, 90.00, 90.00, 90.00
R / Rfree (%) 14.7 / 16.9

Nickel Binding Sites:

The binding sites of Nickel atom in the Structure of Human Haspin Kinase Domain (pdb code 2vuw). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of Human Haspin Kinase Domain, PDB code: 2vuw:

Nickel binding site 1 out of 1 in 2vuw

Go back to Nickel Binding Sites List in 2vuw
Nickel binding site 1 out of 1 in the Structure of Human Haspin Kinase Domain


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of Human Haspin Kinase Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni1801

b:33.2
occ:1.00
O A:HOH2005 2.1 30.7 1.0
O A:HOH2006 2.2 41.1 1.0
NE2 A:HIS563 2.2 24.3 1.0
NE2 A:HIS477 2.2 33.2 1.0
O A:HOH2189 2.6 47.0 1.0
CD2 A:HIS563 3.1 25.5 1.0
CE1 A:HIS477 3.1 44.0 1.0
HD2 A:HIS563 3.2 23.6 1.0
CE1 A:HIS563 3.2 22.7 1.0
CD2 A:HIS477 3.2 29.5 1.0
HE1 A:HIS477 3.3 43.2 1.0
HD2 A:HIS477 3.4 28.0 1.0
HE1 A:HIS563 3.4 20.5 1.0
CG A:HIS563 4.3 18.1 1.0
ND1 A:HIS477 4.3 44.5 1.0
ND1 A:HIS563 4.3 17.6 1.0
CG A:HIS477 4.3 37.0 1.0
HG13 A:VAL473 4.9 30.5 1.0

Reference:

J.Eswaran, D.Patnaik, P.Filippakopoulos, F.Wang, R.L.Stein, J.W.Murray, J.M.G.Higgins, S.Knapp. Structure and Functional Characterization of the Atypical Human Kinase Haspin. Proc.Natl.Acad.Sci.Usa V. 106 20198 2009.
ISSN: ISSN 0027-8424
PubMed: 19918057
DOI: 10.1073/PNAS.0901989106
Page generated: Fri Sep 25 08:15:38 2020
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