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Nickel in PDB 2wmy: Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate.

Enzymatic activity of Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate.

All present enzymatic activity of Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate.:
3.1.3.48;

Protein crystallography data

The structure of Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate., PDB code: 2wmy was solved by H.Huang, G.Hagelueken, C.Whitfield, J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.967 / 2.21
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 101.902, 53.062, 113.909, 90.00, 90.01, 90.00
R / Rfree (%) 20.63 / 26.06

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate. (pdb code 2wmy). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate., PDB code: 2wmy:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in 2wmy

Go back to Nickel Binding Sites List in 2wmy
Nickel binding site 1 out of 2 in the Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate.


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni1149

b:28.6
occ:1.00
NE2 D:HIS47 2.2 15.6 1.0
NE2 A:HIS47 2.3 21.6 1.0
O A:HOH2020 2.4 15.6 1.0
O D:HOH2013 2.5 20.2 1.0
CD2 D:HIS47 3.0 22.7 1.0
CD2 A:HIS47 3.1 20.5 1.0
CE1 D:HIS47 3.3 15.5 1.0
CE1 A:HIS47 3.3 14.1 1.0
CG D:HIS47 4.3 25.1 1.0
CG A:HIS47 4.3 18.9 1.0
ND1 D:HIS47 4.3 26.1 1.0
ND1 A:HIS47 4.4 21.6 1.0
O A:VAL45 4.5 16.2 1.0
O D:VAL45 4.7 18.5 1.0

Nickel binding site 2 out of 2 in 2wmy

Go back to Nickel Binding Sites List in 2wmy
Nickel binding site 2 out of 2 in the Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate.


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the Tyrosine Phosphatase Wzb From Escherichia Coli K30 in Complex with Sulphate. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ni1149

b:28.9
occ:1.00
NE2 B:HIS47 2.2 15.2 1.0
NE2 G:HIS47 2.2 21.8 1.0
CD2 B:HIS47 3.1 23.0 1.0
CE1 G:HIS47 3.1 15.8 1.0
CD2 G:HIS47 3.2 16.9 1.0
CE1 B:HIS47 3.2 19.9 1.0
CG B:HIS47 4.2 24.8 1.0
ND1 G:HIS47 4.3 21.4 1.0
ND1 B:HIS47 4.3 26.5 1.0
CG G:HIS47 4.3 20.8 1.0
O B:VAL45 4.6 19.8 1.0
O G:VAL45 4.6 18.8 1.0

Reference:

G.Hagelueken, H.Huang, I.L.Mainprize, C.Whitfield, J.H.Naismith. Crystal Structures of the Capsular Export Regulating Tyrosine Phosphatases Wzb of Escherichia Coli and Cpsb of Streptococcus Pneumoniae. To Be Published.
Page generated: Fri Sep 25 08:16:15 2020
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