Nickel in PDB 2yal: Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis

The structure of Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis, PDB code: 2yal was solved by V.L.Colledge, M.J.Fogg, V.M.Levdikov, A.Leech, E.J.Dodson, A.J.Wilkinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	41.72 / 2.27
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	36.117, 36.117, 250.342, 90.00, 90.00, 120.00
R / Rfree (%)	28.3 / 43.5

The binding sites of Nickel atom in the Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis (pdb code 2yal). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis, PDB code: 2yal:

Nickel binding site 1 out of 1 in the Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Sinr, Master Regulator of Biofilm Formation in Bacillus Subtilis within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni1110 b:76.8 occ:1.00 CA A:GLY71 1.9 0.6 1.0 O A:GLY71 2.0 0.1 1.0 N A:GLY71 2.1 0.9 1.0 C A:GLY71 2.1 0.3 1.0 N A:PRO72 3.4 98.0 1.0 CD A:PRO72 4.2 94.5 1.0 CA A:PRO72 4.5 89.4 1.0 C A:PRO72 4.8 83.8 1.0 O A:PRO72 4.9 80.9 1.0

V.L.Colledge, M.J.Fogg, V.M.Levdikov, A.Leech, E.J.Dodson, A.J.Wilkinson. Structure and Organisation of Sinr, the Master Regulator of Biofilm Formation in Bacillus Subtilis. J.Mol.Biol. V. 411 597 2011.
ISSN: ISSN 0022-2836
PubMed: 21708175
DOI: 10.1016/J.JMB.2011.06.004