Atomistry » Nickel » PDB 3dse-3hy3 » 3ffo
Atomistry »
  Nickel »
    PDB 3dse-3hy3 »
      3ffo »

Nickel in PDB 3ffo: F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man

Protein crystallography data

The structure of F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man, PDB code: 3ffo was solved by L.Buts, A.De Boer, J.D.M.Olsson, W.Jonckheere, M.De Kerpel, E.De Genst, Y.Guerardel, R.Willaert, L.Wyns, M.Wuhrer, S.Oscarson, H.De Greve, J.Bouckaert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.92 / 2.10
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 87.389, 87.389, 56.809, 90.00, 90.00, 120.00
R / Rfree (%) 23.3 / 27.1

Nickel Binding Sites:

The binding sites of Nickel atom in the F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man (pdb code 3ffo). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man, PDB code: 3ffo:

Nickel binding site 1 out of 1 in 3ffo

Go back to Nickel Binding Sites List in 3ffo
Nickel binding site 1 out of 1 in the F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of F17B-G Lectin Domain with Bound Glcnac(BETA1-2)Man within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni263

b:93.7
occ:0.50
CE1 A:HIS23 3.1 85.1 1.0
ND1 A:HIS23 3.5 89.8 1.0
NE2 A:HIS23 4.2 81.5 1.0
CG A:HIS23 4.7 76.6 1.0

Reference:

E.Lonardi, K.Moonens, L.Buts, A.R.De Boer, J.D.M.Olsson, M.S.Weiss, E.Fabre, Y.Guerardel, A.M.Deelder, S.Oscarson, M.Wuhrer, J.Bouckaert. Structural Sampling of Glycan Interaction Profiles Reveals Mucosal Receptors For Fimbrial Adhesins of Enterotoxigenic Escherichia Coli. Biology (Basel) V. 2 894 2013.
ISSN: ESSN 2079-7737
PubMed: 24833052
DOI: 10.3390/BIOLOGY2030894
Page generated: Wed Dec 16 01:23:33 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy