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Nickel in PDB 3hg9: Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192

Protein crystallography data

The structure of Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192, PDB code: 3hg9 was solved by V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.40
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 64.516, 64.516, 143.134, 90.00, 90.00, 120.00
R / Rfree (%) 23.5 / 26.7

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192 (pdb code 3hg9). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192, PDB code: 3hg9:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in 3hg9

Go back to Nickel Binding Sites List in 3hg9
Nickel binding site 1 out of 2 in the Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni501

b:99.0
occ:1.00
NE2 A:HIS31 3.0 57.4 1.0
NE2 B:HIS126 3.7 61.9 1.0
CE1 A:HIS31 3.7 57.1 1.0
CD2 A:HIS31 4.0 55.7 1.0
O A:HOH197 4.1 39.7 1.0
CE1 B:HIS126 4.3 60.5 1.0
CD2 B:HIS127 4.6 65.9 1.0
O B:HOH142 4.7 52.4 1.0
NE2 B:HIS127 4.7 67.1 1.0
CD2 B:HIS126 4.7 60.6 1.0
ND1 A:HIS31 4.9 58.7 1.0

Nickel binding site 2 out of 2 in 3hg9

Go back to Nickel Binding Sites List in 3hg9
Nickel binding site 2 out of 2 in the Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni502

b:0.0
occ:1.00
NE2 B:HIS31 2.7 55.2 1.0
NE2 A:HIS126 2.9 63.3 1.0
CD2 A:HIS126 2.9 61.8 1.0
O A:HOH147 3.2 29.0 1.0
CD2 B:HIS31 3.4 55.7 1.0
CE1 B:HIS31 3.9 57.2 1.0
CE1 A:HIS126 4.2 61.5 1.0
CG A:HIS126 4.2 60.5 1.0
CG B:HIS31 4.7 55.0 1.0
ND1 A:HIS126 4.8 60.2 1.0
ND1 B:HIS31 4.9 55.3 1.0

Reference:

V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Putative Pilm Protein From Pseudomonas Aeruginosa 2192 To Be Published.
Page generated: Fri Sep 25 08:23:28 2020
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