Nickel in PDB 4fr2: Alcohol Dehydrogenase From Oenococcus Oeni

The structure of Alcohol Dehydrogenase From Oenococcus Oeni, PDB code: 4fr2 was solved by K.Fodor, E.Skander, M.Wilmanns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	76.56 / 3.20
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	88.825, 88.825, 151.028, 90.00, 90.00, 90.00
R / Rfree (%)	27.9 / 33.4

The binding sites of Nickel atom in the Alcohol Dehydrogenase From Oenococcus Oeni (pdb code 4fr2). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Alcohol Dehydrogenase From Oenococcus Oeni, PDB code: 4fr2:

Nickel binding site 1 out of 1 in the Alcohol Dehydrogenase From Oenococcus Oeni


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Alcohol Dehydrogenase From Oenococcus Oeni within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni501 b:84.7 occ:1.00 OE1 A:GLN202 1.8 64.4 1.0 NE2 A:HIS267 2.2 90.1 1.0 NE2 A:HIS281 2.5 98.7 1.0 OD1 A:ASP198 2.6 73.0 1.0 CD A:GLN202 3.1 65.1 1.0 CD2 A:HIS267 3.2 90.0 1.0 CE1 A:HIS267 3.2 90.0 1.0 OD2 A:ASP198 3.3 71.4 1.0 CG A:ASP198 3.3 71.4 1.0 CD2 A:HIS281 3.3 98.5 1.0 CE1 A:HIS281 3.5 98.8 1.0 CG A:GLN202 4.0 65.3 1.0 NE2 A:GLN202 4.0 65.4 1.0 ND1 A:HIS267 4.3 89.7 1.0 CG A:HIS267 4.3 89.4 1.0 CG A:HIS281 4.5 98.3 1.0 ND1 A:HIS281 4.6 98.7 1.0 CB A:ASP198 4.8 70.1 1.0 O A:ASP198 4.9 69.2 1.0

S.Elleuche, K.Fodor, B.Klippel, A.Von Der Heyde, M.Wilmanns, G.Antranikian. Structural and Biochemical Characterisation of A Nad(+)-Dependent Alcohol Dehydrogenase From Oenococcus Oeni As A New Model Molecule For Industrial Biotechnology Applications. Appl.Microbiol.Biotechnol. V. 97 8963 2013.
ISSN: ISSN 0175-7598
PubMed: 23385476
DOI: 10.1007/S00253-013-4725-0