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Nickel in PDB 4mts: Ni- and Zn-Bound GLOA2 at High Resolution

Enzymatic activity of Ni- and Zn-Bound GLOA2 at High Resolution

All present enzymatic activity of Ni- and Zn-Bound GLOA2 at High Resolution:
4.4.1.5;

Protein crystallography data

The structure of Ni- and Zn-Bound GLOA2 at High Resolution, PDB code: 4mts was solved by R.Bythell-Douglas, C.S.Bond, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.56 / 1.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 50.700, 50.700, 327.640, 90.00, 90.00, 120.00
R / Rfree (%) 16.4 / 20.1

Other elements in 4mts:

The structure of Ni- and Zn-Bound GLOA2 at High Resolution also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Nickel Binding Sites:

The binding sites of Nickel atom in the Ni- and Zn-Bound GLOA2 at High Resolution (pdb code 4mts). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Ni- and Zn-Bound GLOA2 at High Resolution, PDB code: 4mts:

Nickel binding site 1 out of 1 in 4mts

Go back to Nickel Binding Sites List in 4mts
Nickel binding site 1 out of 1 in the Ni- and Zn-Bound GLOA2 at High Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Ni- and Zn-Bound GLOA2 at High Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni203

b:12.5
occ:1.00
NE2 B:HIS5 2.0 10.2 1.0
OE1 B:GLU56 2.1 10.5 1.0
OE1 A:GLU122 2.1 12.2 1.0
NE2 A:HIS74 2.2 10.8 1.0
O3 A:GOL201 2.2 14.8 1.0
O2 A:GOL201 2.3 16.7 1.0
C3 A:GOL201 3.0 20.7 1.0
CE1 B:HIS5 3.0 10.3 1.0
CD B:GLU56 3.0 19.0 1.0
CE1 A:HIS74 3.0 11.1 1.0
C2 A:GOL201 3.1 21.3 1.0
CD2 B:HIS5 3.1 10.2 1.0
CD A:GLU122 3.1 22.7 1.0
CD2 A:HIS74 3.2 10.6 1.0
OE2 B:GLU56 3.3 28.3 1.0
OE2 A:GLU122 3.4 26.6 1.0
ND1 B:HIS5 4.1 10.6 1.0
CG B:HIS5 4.2 9.6 1.0
ND1 A:HIS74 4.2 12.4 1.0
CG A:HIS74 4.3 10.8 1.0
O A:HOH370 4.3 17.1 1.0
CG B:GLU56 4.3 8.4 1.0
CB A:ALA76 4.4 10.2 1.0
CG A:GLU122 4.4 16.4 1.0
CB B:MET7 4.5 7.9 1.0
C1 A:GOL201 4.5 23.8 1.0
CB B:GLU56 4.7 7.7 1.0
CG B:MET7 4.7 8.4 1.0
CB A:GLU122 4.7 12.4 1.0
O1 A:GOL201 4.9 33.0 1.0
CD1 A:ILE124 4.9 18.9 1.0

Reference:

R Bythell-Douglas, G.R.Flematti, M.Challenor, U.Suttisansanee, J.F.Honek, C.S.Bond. Ni- and Zn-Bound GLOA2 at High Resolution To Be Published.
Page generated: Wed Oct 9 18:33:01 2024

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