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Nickel in PDB 4n7o: Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Protein crystallography data
The structure of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution., PDB code: 4n7o
was solved by
K.Sugiyama,
N.Shibayama,
S.Y.Park,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.00 / 2.50 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 228.935, 54.337, 137.884, 90.00, 103.22, 90.00 |
| R / Rfree (%) | 26.7 / 29.2 |
Other elements in 4n7o:
The structure of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. also contains other interesting chemical elements:
| Iron | (Fe) | 6 atoms |
Nickel Binding Sites:
The binding sites of Nickel atom in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
(pdb code 4n7o). This binding sites where shown within
5.0 Angstroms radius around Nickel atom.
In total 6 binding sites of Nickel where determined in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution., PDB code: 4n7o:
Jump to Nickel binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Nickel where determined in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution., PDB code: 4n7o:
Jump to Nickel binding site number: 1; 2; 3; 4; 5; 6;
Nickel binding site 1 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 1 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 1 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Nickel binding site 2 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 2 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 2 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Nickel binding site 3 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 3 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 3 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Nickel binding site 4 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 4 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 4 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Nickel binding site 5 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 5 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 5 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Nickel binding site 6 out of 6 in 4n7o
Go back to
Nickel Binding Sites List in 4n7o
Nickel binding site 6 out
of 6 in the Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Nickel with other atoms in the Ni binding
site number 6 of Capturing the Haemoglobin Allosteric Transition in A Single Crystal Form; Crystal Structure of Half-Liganded Human Haemoglobin with Phosphate at 2.5 A Resolution. within 5.0Å range:
|
Reference:
N.Shibayama,
K.Sugiyama,
J.R.Tame,
S.Y.Park.
Capturing the Hemoglobin Allosteric Transition in A Single Crystal Form J.Am.Chem.Soc. V. 136 5097 2014.
ISSN: ISSN 0002-7863
PubMed: 24635037
DOI: 10.1021/JA500380E
Page generated: Wed Oct 9 18:33:43 2024
ISSN: ISSN 0002-7863
PubMed: 24635037
DOI: 10.1021/JA500380E
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