Nickel in PDB 4nuk: Crystal Structure of Nickel-Bound Na-Asp-2

The structure of Crystal Structure of Nickel-Bound Na-Asp-2, PDB code: 4nuk was solved by A.Hofmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.45 / 2.40
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	39.921, 61.958, 77.082, 90.00, 90.00, 90.00
R / Rfree (%)	18.3 / 24.4

The binding sites of Nickel atom in the Crystal Structure of Nickel-Bound Na-Asp-2 (pdb code 4nuk). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Nickel-Bound Na-Asp-2, PDB code: 4nuk:

Nickel binding site 1 out of 1 in the Crystal Structure of Nickel-Bound Na-Asp-2


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Nickel-Bound Na-Asp-2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni300 b:38.6 occ:1.00 NE2 A:HIS88 2.3 27.3 1.0 NE2 A:HIS148 2.5 26.6 1.0 CD2 A:HIS88 3.2 19.6 1.0 CE1 A:HIS88 3.2 16.7 1.0 CD2 A:HIS148 3.3 22.2 1.0 O A:HOH455 3.3 42.4 1.0 CE1 A:HIS148 3.4 25.9 1.0 O A:HOH470 3.5 32.1 1.0 O A:HOH457 4.2 33.1 1.0 ND1 A:HIS88 4.3 20.1 1.0 CG A:HIS88 4.3 23.8 1.0 CG A:HIS148 4.4 28.3 1.0 ND1 A:HIS148 4.4 28.2 1.0 O A:HOH456 4.6 29.4 1.0 O A:GLU99 5.0 16.8 1.0

L.Mason, L.Tribolet, A.Simon, N.Von Gnielinski, L.Nienaber, P.Taylor, C.Willis, M.K.Jones, P.W.Sternberg, R.B.Gasser, A.Loukas, A.Hofmann. Probing the Equatorial Groove of the Hookworm Protein and Vaccine Candidate Antigen, Na-Asp-2. Int.J.Biochem.Cell Biol. V. 50 146 2014.
ISSN: ISSN 1357-2725
PubMed: 24631931
DOI: 10.1016/J.BIOCEL.2014.03.003