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Nickel in PDB 4rle: Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara

Protein crystallography data

The structure of Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara, PDB code: 4rle was solved by A.Dickmanns, P.Neumann, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.46 / 1.30
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 56.521, 56.521, 58.201, 90.00, 90.00, 120.00
R / Rfree (%) 13 / 15.4

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara (pdb code 4rle). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara, PDB code: 4rle:

Nickel binding site 1 out of 1 in 4rle

Go back to Nickel Binding Sites List in 4rle
Nickel binding site 1 out of 1 in the Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the C-Di-Amp Binding Pii-Like Protein Dara within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni202

b:10.8
occ:0.32
NE2 A:HIS-4 2.2 11.4 1.0
NE2 A:HIS-2 2.2 10.8 1.0
CE1 A:HIS-4 3.1 12.4 1.0
CE1 A:HIS-2 3.2 10.7 1.0
CD2 A:HIS-2 3.2 11.2 1.0
CD2 A:HIS-4 3.2 11.7 1.0
ND1 A:HIS-4 4.2 14.5 1.0
ND1 A:HIS-2 4.3 11.2 1.0
CG A:HIS-4 4.3 12.4 1.0
CG A:HIS-2 4.3 10.1 1.0

Reference:

J.Gundlach, A.Dickmanns, K.Schroder-Tittmann, P.Neumann, J.Kaesler, J.Kampf, C.Herzberg, E.Hammer, F.Schwede, V.Kaever, K.Tittmann, J.Stulke, R.Ficner. Identification, Characterization and Structure Analysis of the C-Di-Amp Binding Pii-Like Protein Dara To Be Published.
Page generated: Wed Oct 9 18:42:22 2024

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