Nickel in PDB 4tnn: Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification.

The structure of Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification., PDB code: 4tnn was solved by O.A.Gasiorowska, M.T.Cymborowski, K.B.Handing, I.G.Shabalin, E.Zasadzinska, E.Niedzialkowska, P.J.Porebski, W.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.95
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	76.583, 76.583, 61.944, 90.00, 90.00, 120.00
R / Rfree (%)	16.7 / 21.5

The binding sites of Nickel atom in the Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification. (pdb code 4tnn). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification., PDB code: 4tnn:

Nickel binding site 1 out of 1 in the Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification.


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni207 b:27.5 occ:1.00 NE2 A:HIS144 2.2 27.9 1.0 NE2 A:HIS193 2.2 36.5 1.0 NE2 A:HIS153 2.3 25.9 1.0 CD2 A:HIS144 3.0 28.4 1.0 CE1 A:HIS193 3.2 35.0 1.0 CE1 A:HIS153 3.2 27.7 1.0 CD2 A:HIS193 3.2 37.6 1.0 CE1 A:HIS144 3.2 28.8 1.0 CD2 A:HIS153 3.3 26.5 1.0 CG A:HIS144 4.2 28.3 1.0 ND1 A:HIS144 4.3 28.4 1.0 ND1 A:HIS193 4.3 35.0 1.0 ND1 A:HIS153 4.3 27.4 1.0 CG A:HIS193 4.4 36.9 1.0 CG A:HIS153 4.4 25.9 1.0 OH A:TYR177 4.6 24.5 1.0

O.A.Gasiorowska, M.T.Cymborowski, K.B.Handing, I.G.Shabalin, E.Zasadzinska, E.Niedzialkowska, P.J.Porebski, W.Minor. Crystal Structure of Escherichia Coli Protein Yoda in Complex with Ni - Artifact of Purification. To Be Published.