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Nickel in PDB 4w73: Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21

Protein crystallography data

The structure of Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21, PDB code: 4w73 was solved by D.J.Leibly, G.S.Waldo, T.O.Yeates, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.18 / 2.79
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 69.740, 70.580, 77.500, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 29.7

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21 (pdb code 4w73). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21, PDB code: 4w73:

Nickel binding site 1 out of 1 in 4w73

Go back to Nickel Binding Sites List in 4w73
Nickel binding site 1 out of 1 in the Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Full-Length Split Gfp Mutant E115C/T118H Disulfide Dimer P 21 21 21 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni301

b:0.8
occ:1.00
OD2 A:ASP19 2.3 89.2 1.0
OE2 A:GLU124 2.7 77.9 1.0
CD A:GLU124 3.4 77.7 1.0
CG A:ASP19 3.4 88.9 1.0
OE1 A:GLU124 3.9 77.9 1.0
CB A:ASP19 4.0 88.5 1.0
CG A:GLU124 4.3 77.3 1.0
N1 A:IMD302 4.5 82.2 1.0
OD1 A:ASP19 4.5 89.1 1.0
OD2 B:ASP117 4.9 88.0 1.0

Reference:

D.J.Leibly, M.A.Arbing, I.Pashkov, N.Devore, G.S.Waldo, T.C.Terwilliger, T.O.Yeates. Engineering Novel Oligomeric Gfp Molecules For Synthetic Symmetrization Applications To Be Published.
Page generated: Wed Oct 9 19:18:42 2024

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