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Nickel in PDB 4xrf: Crystal Structure of Mepr Like Protein Complexed with Pseudoligands

Protein crystallography data

The structure of Crystal Structure of Mepr Like Protein Complexed with Pseudoligands, PDB code: 4xrf was solved by M.Hong, M.I.Kim, M.U.Cho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.72 / 2.16
Space group P 62 2 2
Cell size a, b, c (Å), α, β, γ (°) 111.172, 111.172, 67.368, 90.00, 90.00, 120.00
R / Rfree (%) 21.3 / 23.8

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of Mepr Like Protein Complexed with Pseudoligands (pdb code 4xrf). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Mepr Like Protein Complexed with Pseudoligands, PDB code: 4xrf:

Nickel binding site 1 out of 1 in 4xrf

Go back to Nickel Binding Sites List in 4xrf
Nickel binding site 1 out of 1 in the Crystal Structure of Mepr Like Protein Complexed with Pseudoligands


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Mepr Like Protein Complexed with Pseudoligands within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni209

b:82.6
occ:1.00
N A:HIS85 3.6 51.3 1.0
NH2 A:ARG90 3.7 68.4 1.0
ND1 A:HIS85 4.0 53.5 1.0
CA A:TYR84 4.0 50.8 1.0
CB A:TYR84 4.1 54.1 1.0
C A:TYR84 4.4 50.1 1.0
CB A:HIS85 4.4 54.1 1.0
O A:HIS85 4.5 53.0 1.0
CA A:HIS85 4.6 52.0 1.0
CG A:HIS85 4.6 54.0 1.0
CZ A:ARG90 4.9 70.6 1.0
CE1 A:HIS85 5.0 53.1 1.0

Reference:

M.Hong, M.I.Kim, M.U.Cho. Crystal Structure of Mepr Like Protein Complexed with Pseudoligands To Be Published.
Page generated: Wed Dec 16 01:38:14 2020

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