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Nickel in PDB 5cxd: 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group

Enzymatic activity of 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group

All present enzymatic activity of 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group:
2.7.8.7;

Protein crystallography data

The structure of 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group, PDB code: 5cxd was solved by A.S.Halavaty, G.Minasov, L.Papazisi, W.F.Anderson, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.29 / 1.75
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 103.117, 103.117, 71.189, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 20.3

Other elements in 5cxd:

The structure of 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group also contains other interesting chemical elements:

Chlorine (Cl) 12 atoms

Nickel Binding Sites:

The binding sites of Nickel atom in the 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group (pdb code 5cxd). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group, PDB code: 5cxd:

Nickel binding site 1 out of 1 in 5cxd

Go back to Nickel Binding Sites List in 5cxd
Nickel binding site 1 out of 1 in the 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl- Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ni201

b:23.4
occ:0.50
ND1 C:HIS3 2.1 27.7 1.0
O C:HOH388 2.2 15.2 0.5
O C:HOH388 2.6 23.7 0.5
CE1 C:HIS3 2.9 26.6 1.0
CG C:HIS3 3.2 22.3 1.0
CE1 C:PHE95 3.6 23.8 1.0
CB C:HIS3 3.7 19.8 1.0
CZ C:PHE95 3.9 23.9 1.0
NE2 C:HIS3 4.1 28.5 1.0
CD2 C:HIS3 4.3 25.8 1.0
CA C:HIS3 4.3 18.0 1.0
CD1 C:PHE95 4.9 21.4 1.0

Reference:

A.S.Halavaty, G.Minasov, L.Papazisi, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). 1.75 Angstrom Resolution Crystal Structure of the Apo-Form Acyl-Carrier-Protein Synthase (Acps) (Acps; Purification Tag Off) From Staphylococcus Aureus Subsp. Aureus Col in the I4 Space Group To Be Published.
Page generated: Thu Oct 10 06:18:32 2024

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