Nickel in PDB 6g40: Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525

All present enzymatic activity of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525:
4.2.99.18;

The structure of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525, PDB code: 6g40 was solved by G.Masuyer, T.Helleday, P.Stenmark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	81.34 / 2.49
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	80.860, 81.335, 168.593, 90.00, 90.00, 90.00
R / Rfree (%)	21.8 / 26.3

The binding sites of Nickel atom in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525 (pdb code 6g40). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525, PDB code: 6g40:

Nickel binding site 1 out of 1 in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH9525 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni403 b:58.5 occ:1.00 NE2 B:HIS276 2.2 56.3 1.0 NE2 C:HIS282 2.2 56.6 1.0 NE2 A:HIS282 2.2 57.5 1.0 NE2 A:HIS276 2.2 52.7 1.0 NE2 B:HIS282 2.2 63.3 1.0 NE2 C:HIS276 2.3 58.8 1.0 CE1 C:HIS282 3.1 58.7 1.0 CD2 B:HIS276 3.1 58.1 1.0 CE1 A:HIS276 3.2 54.0 1.0 CE1 B:HIS276 3.2 56.8 1.0 CE1 A:HIS282 3.2 59.3 1.0 CE1 C:HIS276 3.2 59.3 1.0 CE1 B:HIS282 3.2 62.2 1.0 CD2 C:HIS282 3.2 56.6 1.0 CD2 B:HIS282 3.2 61.2 1.0 CD2 A:HIS282 3.2 58.1 1.0 CD2 A:HIS276 3.2 53.2 1.0 CD2 C:HIS276 3.3 56.2 1.0 ND1 C:HIS282 4.2 57.7 1.0 ND1 B:HIS276 4.3 56.8 1.0 CG B:HIS276 4.3 58.8 1.0 ND1 A:HIS276 4.3 53.0 1.0 ND1 A:HIS282 4.3 58.6 1.0 ND1 B:HIS282 4.3 62.1 1.0 ND1 C:HIS276 4.3 57.1 1.0 CG C:HIS282 4.3 58.1 1.0 CG A:HIS282 4.3 59.6 1.0 CG A:HIS276 4.4 53.9 1.0 CG B:HIS282 4.4 62.5 1.0 CG C:HIS276 4.4 56.7 1.0

T.Visnes, A.Cazares-Korner, W.Hao, O.Wallner, G.Masuyer, O.Loseva, O.Mortusewicz, E.Wiita, A.Sarno, A.Manoilov, J.Astorga-Wells, A.S.Jemth, S.Karsten, C.Gokturk, M.Grube, E.J.Homan, M.Scobie, C.B.J.Paulin, H.E.Krokan, P.Baranczewski, P.Artursson, M.Altun, A.J.Jensen, T.Lundback, R.A.Zubarev, P.Stenmark, I.Boldogh, T.Helleday. Small Molecule Inhibitor of OGG1 Suppresses Pro-Inflammatory Gene Expression and Inflammation To Be Published.