Nickel in PDB 6gqn: Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A

The structure of Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A, PDB code: 6gqn was solved by R.J.Lewis, Z.J.Rutter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.85 / 1.80
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	83.084, 26.373, 65.899, 90.00, 106.43, 90.00
R / Rfree (%)	17.8 / 22.5

The binding sites of Nickel atom in the Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A (pdb code 6gqn). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A, PDB code: 6gqn:

Nickel binding site 1 out of 1 in the Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Cell Division Regulator, S. Pneumoniae Gpsb, in Complex with Peptide Fragment of Penicillin Binding Protein PBP2A within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni104 b:12.1 occ:1.00 OE2 B:GLU52 2.0 19.4 1.0 NZ A:LYS57 2.1 17.3 1.0 CD B:GLU52 2.7 16.0 1.0 OE1 B:GLU52 2.8 15.4 1.0 CE A:LYS57 3.0 15.6 1.0 O B:HOH203 4.0 20.4 1.0 CG2 A:ILE53 4.0 17.1 1.0 CG B:GLU52 4.2 13.8 1.0 CD A:LYS57 4.3 17.6 1.0

R.M.Cleverley, Z.J.Rutter, J.Rismondo, F.Corona, H.T.Tsui, F.A.Alatawi, R.A.Daniel, S.Halbedel, O.Massidda, M.E.Winkler, R.J.Lewis. The Cell Cycle Regulator Gpsb Functions As Cytosolic Adaptor For Multiple Cell Wall Enzymes. Nat Commun V. 10 261 2019.
ISSN: ESSN 2041-1723
PubMed: 30651563
DOI: 10.1038/S41467-018-08056-2