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Nickel in PDB 6h8d: Mamm Ctd D249N - Nickel Form

Protein crystallography data

The structure of Mamm Ctd D249N - Nickel Form, PDB code: 6h8d was solved by S.Barber-Zucker, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.16 / 1.62
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 36.852, 94.329, 53.355, 90.00, 90.00, 90.00
R / Rfree (%) 17.3 / 21.4

Nickel Binding Sites:

The binding sites of Nickel atom in the Mamm Ctd D249N - Nickel Form (pdb code 6h8d). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Mamm Ctd D249N - Nickel Form, PDB code: 6h8d:

Nickel binding site 1 out of 1 in 6h8d

Go back to Nickel Binding Sites List in 6h8d
Nickel binding site 1 out of 1 in the Mamm Ctd D249N - Nickel Form


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Mamm Ctd D249N - Nickel Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni403

b:67.8
occ:1.00
O A:HOH520 2.1 60.4 1.0
O A:HOH551 2.1 47.5 1.0
O A:HOH539 2.1 58.5 1.0
NE2 A:HIS264 2.3 41.6 1.0
O A:HOH563 2.4 48.8 1.0
CD2 A:HIS264 3.1 39.7 1.0
CE1 A:HIS264 3.3 41.7 1.0
OE2 A:GLU268 3.9 50.0 1.0
OE2 A:GLU261 4.0 39.9 0.5
OE1 A:GLU268 4.0 53.0 1.0
CD A:GLU268 4.2 44.8 1.0
CG A:HIS264 4.2 33.0 1.0
O A:HOH501 4.3 54.5 1.0
ND1 A:HIS264 4.3 41.1 1.0
O A:HOH556 4.9 52.6 1.0

Reference:

S.Barber-Zucker, R.Zarivach. Mamm Ctd D249N - Nickel Form To Be Published.
Page generated: Thu Oct 10 08:30:56 2024

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