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Nickel in PDB 6has: Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120)

Protein crystallography data

The structure of Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120), PDB code: 6has was solved by L.Popilka, A.Bracher, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.38
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 59.732, 59.732, 83.305, 90.00, 90.00, 120.00
R / Rfree (%) 15.3 / 18.9

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120) (pdb code 6has). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120), PDB code: 6has:

Nickel binding site 1 out of 1 in 6has

Go back to Nickel Binding Sites List in 6has
Nickel binding site 1 out of 1 in the Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120)


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Small Subunit-Like Domain of Rubisco Activase From Nostoc Sp. (Strain Pcc 7120) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni501

b:16.2
occ:1.00
O A:HOH623 2.1 17.4 1.0
ND1 A:HIS325 2.1 14.2 1.0
O A:HOH674 2.2 18.4 1.0
N A:HIS325 2.2 16.2 1.0
CE1 A:HIS325 3.1 13.8 1.0
CG A:HIS325 3.1 14.1 1.0
CA A:HIS325 3.2 15.9 1.0
O A:HOH603 3.3 35.2 1.0
CB A:HIS325 3.4 15.6 1.0
OE2 A:GLU378 4.1 15.2 1.0
OE1 A:GLU378 4.1 16.9 1.0
O A:HOH692 4.2 35.8 1.0
NE2 A:HIS325 4.2 15.0 1.0
CD2 A:HIS325 4.2 14.7 1.0
O A:HOH689 4.3 31.8 1.0
C A:HIS325 4.5 15.8 1.0
CD A:GLU378 4.5 15.5 1.0
O A:HOH699 4.9 37.5 1.0

Reference:

M.Flecken, L.Popilka, A.Bracher, F.U.Hartl, M.Hayer-Hartl. Tba To Be Published.
Page generated: Thu Oct 10 08:31:13 2024

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