Nickel in PDB 6r44: Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group

The structure of Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group, PDB code: 6r44 was solved by S.Morera, L.Marty, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.19 / 1.99
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	66.920, 41.380, 104.620, 90.00, 95.85, 90.00
R / Rfree (%)	19.5 / 22.6

The binding sites of Nickel atom in the Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group (pdb code 6r44). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group, PDB code: 6r44:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni401 b:24.3 occ:1.00 NE2 A:HIS213 2.1 24.2 1.0 NE2 A:HIS235 2.2 26.5 1.0 NE2 A:HIS77 2.2 23.9 1.0 NE2 A:HIS147 2.2 20.3 1.0 NE2 A:HIS102 2.2 23.9 1.0 NE2 A:HIS286 2.3 22.2 1.0 CE1 A:HIS213 3.0 24.9 1.0 CE1 A:HIS102 3.1 24.1 1.0 CE1 A:HIS235 3.1 26.6 1.0 CE1 A:HIS77 3.1 23.8 1.0 CD2 A:HIS235 3.2 26.7 1.0 CD2 A:HIS213 3.2 24.8 1.0 CD2 A:HIS77 3.2 25.3 1.0 CE1 A:HIS147 3.2 20.0 1.0 CD2 A:HIS286 3.2 22.0 1.0 CD2 A:HIS147 3.2 20.5 1.0 CD2 A:HIS102 3.3 24.3 1.0 CE1 A:HIS286 3.3 21.7 1.0 ND1 A:HIS213 4.2 26.4 1.0 CG A:HIS213 4.3 24.6 1.0 ND1 A:HIS235 4.3 28.3 1.0 CG A:HIS235 4.3 27.5 1.0 ND1 A:HIS77 4.3 25.0 1.0 CG A:HIS77 4.3 24.6 1.0 ND1 A:HIS102 4.3 25.2 1.0 CG A:HIS147 4.3 19.8 1.0 ND1 A:HIS147 4.3 21.2 1.0 CG A:HIS286 4.3 21.1 1.0 CG A:HIS102 4.4 23.4 1.0 ND1 A:HIS286 4.4 23.0 1.0

Nickel binding site 2 out of 2 in the Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Structure of the Sbp Fpvc in Complex with NI2+ Ion From P.Aeruginosa From P21 Space Group within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni401 b:27.1 occ:1.00 NE2 B:HIS213 2.1 26.5 1.0 NE2 B:HIS77 2.2 28.6 1.0 NE2 B:HIS235 2.2 29.5 1.0 NE2 B:HIS102 2.2 26.9 1.0 NE2 B:HIS147 2.2 27.5 1.0 NE2 B:HIS286 2.3 27.1 1.0 CE1 B:HIS213 3.1 27.2 1.0 CE1 B:HIS102 3.1 27.2 1.0 CE1 B:HIS235 3.1 30.1 1.0 CD2 B:HIS77 3.1 30.0 1.0 CD2 B:HIS147 3.2 27.8 1.0 CE1 B:HIS147 3.2 27.3 1.0 CD2 B:HIS213 3.2 27.3 1.0 CE1 B:HIS77 3.2 27.9 1.0 CD2 B:HIS235 3.2 30.5 1.0 CD2 B:HIS102 3.2 27.6 1.0 CD2 B:HIS286 3.2 27.6 1.0 CE1 B:HIS286 3.3 26.4 1.0 ND1 B:HIS213 4.2 28.9 1.0 ND1 B:HIS102 4.2 27.9 1.0 CG B:HIS213 4.3 27.3 1.0 CG B:HIS147 4.3 27.5 1.0 ND1 B:HIS235 4.3 32.3 1.0 ND1 B:HIS147 4.3 29.3 1.0 CG B:HIS77 4.3 29.7 1.0 CG B:HIS102 4.3 26.8 1.0 CG B:HIS235 4.3 31.6 1.0 ND1 B:HIS77 4.3 30.2 1.0 CG B:HIS286 4.4 26.3 1.0 ND1 B:HIS286 4.4 27.8 1.0

A.Vigouroux, M.Aumont-Nicaise, A.Boussac, L.Marty, L.Lo Bello, P.Legrand, K.Brillet, I.J.Schalk, S.Morera. A Unique Ferrous Iron Binding Mode Is Associated with Large Conformational Changes For the Transport Protein Fpvc of Pseudomonas Aeruginosa. Febs J. 2019.
ISSN: ISSN 1742-464X
PubMed: 31318478
DOI: 10.1111/FEBS.15004