Atomistry » Nickel » PDB 6r44-6vwy » 6s5i
Atomistry »
  Nickel »
    PDB 6r44-6vwy »
      6s5i »

Nickel in PDB 6s5i: Structure of the Lausanne Variant of Myxoma Virus M062 Protein

Protein crystallography data

The structure of Structure of the Lausanne Variant of Myxoma Virus M062 Protein, PDB code: 6s5i was solved by P.O'byrne, A.R.Khan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.41 / 2.45
Space group P 64
Cell size a, b, c (Å), α, β, γ (°) 94.827, 94.827, 44.136, 90, 90, 120
R / Rfree (%) 21.1 / 26.6

Nickel Binding Sites:

The binding sites of Nickel atom in the Structure of the Lausanne Variant of Myxoma Virus M062 Protein (pdb code 6s5i). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of the Lausanne Variant of Myxoma Virus M062 Protein, PDB code: 6s5i:

Nickel binding site 1 out of 1 in 6s5i

Go back to Nickel Binding Sites List in 6s5i
Nickel binding site 1 out of 1 in the Structure of the Lausanne Variant of Myxoma Virus M062 Protein


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of the Lausanne Variant of Myxoma Virus M062 Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni201

b:117.8
occ:1.00
N A:SER-1 2.1 112.1 1.0
ND1 A:HIS0 2.2 123.5 1.0
N A:HIS0 2.2 119.2 1.0
N A:GLY-2 2.4 115.5 1.0
C A:GLY-2 2.8 115.8 1.0
C A:SER-1 2.8 114.5 1.0
CA A:SER-1 2.9 111.2 1.0
CE1 A:HIS0 3.0 127.5 1.0
CA A:GLY-2 3.1 111.9 1.0
CG A:HIS0 3.2 117.4 1.0
CA A:HIS0 3.2 117.4 1.0
N A:MET1 3.5 122.3 1.0
CB A:HIS0 3.6 112.7 1.0
C A:HIS0 3.8 115.4 1.0
O A:GLY-2 3.8 124.0 1.0
O A:SER-1 3.9 117.2 1.0
NE2 A:HIS0 4.1 124.6 1.0
CB A:SER-1 4.1 114.6 1.0
CD2 A:HIS0 4.2 124.2 1.0
OG A:SER-1 4.3 115.3 1.0
CG A:MET1 4.4 132.2 1.0
CA A:MET1 4.6 118.5 1.0
CB A:MET1 4.6 121.7 1.0
O A:HIS0 5.0 105.6 1.0

Reference:

P.O'byrne, A.R.Khan. Structure of the Lausanne Variant of Myxoma Virus M062 Protein To Be Published.
Page generated: Fri Dec 17 11:23:44 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy