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Nickel in PDB 8cey: Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233

Enzymatic activity of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233

All present enzymatic activity of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233:
4.2.99.18;

Protein crystallography data

The structure of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233, PDB code: 8cey was solved by S.Kosenina, E.R.Scaletti, P.Stenmark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.08 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 81.632, 81.763, 170.486, 90, 90, 90
R / Rfree (%) 24.4 / 28.3

Nickel Binding Sites:

The binding sites of Nickel atom in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233 (pdb code 8cey). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233, PDB code: 8cey:

Nickel binding site 1 out of 1 in 8cey

Go back to Nickel Binding Sites List in 8cey
Nickel binding site 1 out of 1 in the Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni402

b:39.8
occ:1.00
 NE2 B:HIS282 2.0 40.5 1.0
NE2 C:HIS282 2.1 34.3 1.0
NE2 A:HIS282 2.1 43.5 1.0
NE2 B:HIS276 2.2 39.2 1.0
NE2 A:HIS276 2.2 39.2 1.0
NE2 C:HIS276 2.3 38.5 1.0
CE1 B:HIS282 3.0 41.0 1.0
CE1 C:HIS282 3.0 38.8 1.0
CE1 A:HIS282 3.0 40.1 1.0
CD2 B:HIS282 3.0 42.8 1.0
CE1 B:HIS276 3.1 43.2 1.0
CD2 B:HIS276 3.1 41.3 1.0
CD2 A:HIS276 3.2 34.3 1.0
CD2 C:HIS276 3.2 41.4 1.0
CD2 C:HIS282 3.2 33.8 1.0
CE1 A:HIS276 3.2 36.3 1.0
CD2 A:HIS282 3.2 38.6 1.0
CE1 C:HIS276 3.3 40.9 1.0
ND1 B:HIS282 4.1 37.9 1.0
CG B:HIS282 4.1 41.5 1.0
ND1 C:HIS282 4.1 32.5 1.0
ND1 A:HIS282 4.2 41.0 1.0
ND1 B:HIS276 4.2 39.0 1.0
CG C:HIS282 4.2 35.8 1.0
CG B:HIS276 4.3 37.8 1.0
ND1 A:HIS276 4.3 36.0 1.0
CG A:HIS276 4.3 35.5 1.0
CG A:HIS282 4.3 40.7 1.0
CG C:HIS276 4.3 38.7 1.0
ND1 C:HIS276 4.4 40.5 1.0

Reference:

S.Kosenina, E.R.Scaletti, P.Stenmark. Structure of the Mouse 8-Oxoguanine Dna Glycosylase MOGG1 in Complex with Ligand TH11233 To Be Published.
Page generated: Thu Oct 10 09:38:13 2024

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