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Nickel in PDB 8q5e: Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn

Protein crystallography data

The structure of Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn, PDB code: 8q5e was solved by H.J.Rozeboom, M.W.Fraaije, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.51 / 2.40
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 153.926, 153.926, 36.039, 90, 90, 120
R / Rfree (%) 22.7 / 29.4

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn (pdb code 8q5e). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn, PDB code: 8q5e:

Nickel binding site 1 out of 1 in 8q5e

Go back to Nickel Binding Sites List in 8q5e
Nickel binding site 1 out of 1 in the Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of PPSB1-Lov Protein From Pseudomonas Putida with Covalent Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni202

b:110.1
occ:1.00
OE2 A:GLU24 2.6 108.4 1.0
CD A:GLU24 3.7 100.9 1.0
OE1 A:GLU24 4.1 111.9 1.0
CG A:GLU24 5.0 96.8 1.0

Reference:

Y.Tong, S.G.Kaya, S.Russo, H.J.Rozeboom, H.J.Wijma, M.W.Fraaije. Fixing Flavins: Hijacking A Flavin Transferase For Equipping Flavoproteins with A Covalent Flavin Cofactor To Be Published.
Page generated: Thu Oct 10 09:47:00 2024

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