Nickel in PDB 8qov: Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y

The structure of Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y, PDB code: 8qov was solved by G.Rizzi, C.Visentin, F.Di Pisa, S.Ricagno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.26 / 1.60
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	88.746, 88.746, 88.746, 90, 90, 90
R / Rfree (%)	19 / 21.6

The binding sites of Nickel atom in the Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y (pdb code 8qov). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y, PDB code: 8qov:

Nickel binding site 1 out of 1 in the Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni501 b:39.5 occ:0.75 H A:HIS0 1.1 46.8 1.0 HD1 A:HIS0 1.2 52.4 0.0 H A:SER-1 1.2 49.7 1.0 H2 A:GLY-2 1.9 50.2 1.0 N A:SER-1 1.9 49.2 1.0 ND1 A:HIS0 2.0 49.9 1.0 N A:HIS0 2.0 47.4 1.0 H1 A:GLY-2 2.1 50.9 1.0 N A:GLY-2 2.3 51.2 1.0 C A:SER-1 2.8 48.3 1.0 H A:MET1 2.8 38.2 1.0 CA A:SER-1 2.8 49.9 1.0 C A:GLY-2 2.9 51.6 1.0 CE1 A:HIS0 3.0 53.2 1.0 CG A:HIS0 3.0 52.4 1.0 CA A:GLY-2 3.1 49.9 1.0 H3 A:GLY-2 3.1 50.6 1.0 CA A:HIS0 3.1 44.6 1.0 HE1 A:HIS0 3.2 52.4 1.0 CB A:HIS0 3.4 48.5 1.0 HA A:SER-1 3.4 49.4 1.0 HB3 A:HIS0 3.4 48.9 1.0 N A:MET1 3.5 37.9 1.0 HA2 A:GLY-2 3.7 50.3 1.0 HA3 A:GLY-2 3.8 51.0 1.0 OG A:SER-1 3.8 52.3 1.0 C A:HIS0 3.8 40.8 1.0 CB A:SER-1 3.9 50.8 1.0 HA A:HIS0 3.9 45.4 1.0 O A:SER-1 4.0 50.3 1.0 O A:GLY-2 4.0 52.8 1.0 HG A:SER-1 4.1 52.8 0.0 NE2 A:HIS0 4.1 53.6 1.0 CD2 A:HIS0 4.1 54.4 1.0 HB2 A:MET1 4.2 40.6 1.0 HB2 A:HIS0 4.3 48.5 1.0 HB3 A:SER-1 4.4 51.2 1.0 HB2 A:SER-1 4.6 51.1 1.0 HE1 A:MET1 4.6 51.0 1.0 CA A:MET1 4.7 35.0 1.0 O A:MET1 4.8 30.6 1.0 CB A:MET1 4.9 41.5 1.0 HG3 A:MET1 4.9 45.4 1.0 O A:HIS0 4.9 37.8 1.0 HE2 A:HIS0 5.0 55.3 0.0 HD2 A:HIS0 5.0 53.8 1.0

G.Rizzi, C.Visentin, F.Di Pisa, S.Ricagno. Capra Hircus Reactive Intermediate Deaminase A Mutant - I126Y To Be Published.