Nickel in PDB 1kjt: Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap

The structure of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap, PDB code: 1kjt was solved by V.N.Bavro, M.Sola, A.Bracher, M.Kneussel, H.Betz, W.Weissenhorn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	29.720, 56.040, 64.990, 90.00, 90.00, 90.00
R / Rfree (%)	23.5 / 26.1

The structure of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Nickel atom in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap (pdb code 1kjt). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap, PDB code: 1kjt:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni201 b:57.5 occ:1.00 NE2 A:HIS9 2.3 44.1 1.0 O A:HOH226 2.6 56.6 1.0 CD2 A:HIS9 2.8 43.1 1.0 O A:HOH227 3.0 63.5 1.0 CE1 A:HIS9 3.4 41.4 1.0 CG A:HIS9 4.0 43.6 1.0 O A:HOH228 4.2 50.2 1.0 ND1 A:HIS9 4.3 41.9 1.0 OE1 A:GLU8 5.0 62.1 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni202 b:41.0 occ:1.00 O A:HOH255 1.7 27.9 1.0 O A:HOH238 1.9 42.4 1.0 NE2 A:HIS69 2.1 36.9 1.0 O A:HOH207 3.0 49.4 1.0 CD2 A:HIS69 3.0 40.2 1.0 CE1 A:HIS69 3.1 36.1 1.0 ND1 A:HIS69 4.2 39.3 1.0 CG A:HIS69 4.2 40.6 1.0 O A:ARG67 4.6 49.8 1.0

V.N.Bavro, M.Sola, A.Bracher, M.Kneussel, H.Betz, W.Weissenhorn. Crystal Structure of the Gaba(A)-Receptor-Associated Protein, Gabarap. Embo Rep. V. 3 183 2002.
ISSN: ISSN 1469-221X
PubMed: 11818336
DOI: 10.1093/EMBO-REPORTS/KVF026