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Nickel in PDB 1mn0: Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose

Enzymatic activity of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose

All present enzymatic activity of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose:
5.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose, PDB code: 1mn0 was solved by J.B.Thoden, J.Kim, F.M.Raushel, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.100, 76.400, 210.900, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose (pdb code 1mn0). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose, PDB code: 1mn0:

Nickel binding site 1 out of 1 in 1mn0

Go back to Nickel Binding Sites List in 1mn0
Nickel binding site 1 out of 1 in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Complexed with D-Xylose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni349

b:20.8
occ:1.00
 OD2 B:ASP13 2.4 17.5 1.0
OD1 A:ASP13 2.4 16.1 1.0
O A:HOH540 2.4 11.9 1.0
O B:HOH570 2.4 13.8 1.0
O B:HOH573 2.5 37.0 1.0
CG B:ASP13 3.1 23.0 1.0
CG A:ASP13 3.1 21.8 1.0
OD1 B:ASP13 3.2 17.2 1.0
OD2 A:ASP13 3.3 18.2 1.0
O A:SER12 4.2 16.0 1.0
O B:SER12 4.4 20.2 1.0
O B:GLY11 4.4 14.8 1.0
CB B:ASP13 4.5 15.4 1.0
O A:GLY11 4.5 20.2 1.0
CB A:ASP13 4.5 11.4 1.0
C A:SER12 4.6 17.6 1.0
CA B:ASP7 4.6 16.8 1.0
CA B:ASP13 4.7 15.3 1.0
C B:SER12 4.7 16.1 1.0
CA A:ASP13 4.7 8.7 1.0
CB B:ASP7 4.8 16.5 1.0
N A:ASP13 4.8 9.6 1.0
N B:ASP13 4.8 11.2 1.0
CA A:ASP7 4.8 20.4 1.0

Reference:

J.B.Thoden, J.Kim, F.M.Raushel, H.M.Holden. Structural and Kinetic Studies of Sugar Binding to Galactose Mutarotase From Lactococcus Lactis. J.Biol.Chem. V. 277 45458 2002.
ISSN: ISSN 0021-9258
PubMed: 12218067
DOI: 10.1074/JBC.M208395200
Page generated: Wed Oct 9 15:02:15 2024

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