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Nickel in PDB 2fg9: Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution, PDB code: 2fg9 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.57 / 2.20
Space group I 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 134.000, 134.000, 134.000, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 24.5

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution (pdb code 2fg9). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution, PDB code: 2fg9:

Nickel binding site 1 out of 1 in 2fg9

Go back to Nickel Binding Sites List in 2fg9
Nickel binding site 1 out of 1 in the Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of A Putative 5-Nitroimidazole Antibiotic Resistance Protein (BT_3078) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.20 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni160

b:32.5
occ:0.33
NE2 A:HIS-11 2.2 46.4 1.0
NE2 A:HIS-9 2.2 27.5 1.0
CD2 A:HIS-9 3.1 27.7 1.0
CE1 A:HIS-11 3.1 46.5 1.0
CD2 A:HIS-11 3.2 46.9 1.0
CE1 A:HIS-9 3.3 29.0 1.0
ND1 A:HIS-11 4.2 46.4 1.0
CG A:HIS-11 4.3 48.7 1.0
CG A:HIS-9 4.3 32.4 1.0
ND1 A:HIS-9 4.3 28.4 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Aug 18 18:11:43 2025

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