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Nickel in PDB 3tng: The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E.

Protein crystallography data

The structure of The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E., PDB code: 3tng was solved by K.Tan, M.Zhou, K.Kwon, W.F.Anderson, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.59 / 2.16
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.488, 66.488, 125.133, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 24.2

Nickel Binding Sites:

The binding sites of Nickel atom in the The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E. (pdb code 3tng). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E., PDB code: 3tng:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in 3tng

Go back to Nickel Binding Sites List in 3tng
Nickel binding site 1 out of 2 in the The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E.


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni289

b:66.4
occ:1.00
NE2 A:HIS157 2.3 73.8 1.0
CD2 A:HIS157 2.9 62.4 1.0
CE1 A:HIS157 3.5 72.6 1.0
CG A:HIS157 4.2 64.9 1.0
ND1 A:HIS157 4.4 66.8 1.0

Nickel binding site 2 out of 2 in 3tng

Go back to Nickel Binding Sites List in 3tng
Nickel binding site 2 out of 2 in the The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E.


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ni290

b:0.6
occ:1.00
ND1 A:HIS191 2.5 96.2 1.0
O A:HOH314 3.1 68.0 1.0
O A:HOH313 3.1 74.9 1.0
CE1 A:HIS191 3.5 97.5 1.0
CG A:HIS191 3.5 88.9 1.0
CB A:HIS191 3.7 83.9 1.0
CA A:HIS191 4.1 90.2 1.0
NE2 A:HIS191 4.6 95.5 1.0
CD2 A:HIS191 4.7 88.9 1.0

Reference:

K.Tan, M.Zhou, K.Kwon, W.F.Anderson, A.Joachimiak. The Crystal Structure of A Possible Phosphate Acetyl/Butaryl Transferase From Listeria Monocytogenes Egd-E. To Be Published.
Page generated: Wed Oct 9 17:50:01 2024

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