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Nickel in PDB 4bo5: Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution

Enzymatic activity of Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution

All present enzymatic activity of Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution:
1.1.1.100;

Protein crystallography data

The structure of Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution, PDB code: 4bo5 was solved by C.D.Cukier, R.Schnell, Y.Lindqvist, G.Schneider, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.14 / 2.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.150, 108.710, 146.340, 90.00, 90.00, 90.00
R / Rfree (%) 20.225 / 24.791

Other elements in 4bo5:

The structure of Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms

Nickel Binding Sites:

The binding sites of Nickel atom in the Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution (pdb code 4bo5). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution, PDB code: 4bo5:

Nickel binding site 1 out of 1 in 4bo5

Go back to Nickel Binding Sites List in 4bo5
Nickel binding site 1 out of 1 in the Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase (Fabg) From Pseudomonas Aeruginosa in Complex with N-(2-Chlorophenyl)-4-Pyrrol-1-Yl-1,3,5-Triazin-2- Amine at 2.6A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Ni1250

b:81.8
occ:1.00
NE2 D:HIS79 2.5 98.3 1.0
OE1 D:GLN78 2.8 82.2 1.0
NE2 D:HIS75 3.2 64.0 1.0
CE1 D:HIS79 3.2 95.7 1.0
CD2 D:HIS79 3.5 96.7 1.0
CD D:GLN78 3.8 86.9 1.0
CE1 D:HIS75 3.8 65.1 1.0
CD2 D:HIS75 4.0 60.0 1.0
NE2 D:GLN78 4.1 82.9 1.0
ND1 D:HIS79 4.4 93.8 1.0
CG D:HIS79 4.6 93.6 1.0
ND1 D:HIS75 4.8 65.5 1.0
CG D:HIS75 4.9 62.7 1.0

Reference:

C.D.Cukier, A.Hope, A.Elamin, L.Moynie, R.Schnell, S.Schach, H.Kneuper, M.Singh, J.Naismith, Y.Lindqvist, D.Gray, G.Schneider. Discovery of An Allosteric Inhibitor Binding Site in 3-Oxo-Acyl-Acp Reductase From Pseudomonas Aeruginosa Acs Chem.Biol. V. 8 2518 2013.
ISSN: ISSN 1554-8929
PubMed: 24015914
DOI: 10.1021/CB4005063
Page generated: Wed Oct 9 18:02:04 2024

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