Nickel »
PDB 4ofo-4rro »
4pei »
Nickel in PDB 4pei: DBR1 in Complex with Synthetic Branched Rna Analog
Protein crystallography data
The structure of DBR1 in Complex with Synthetic Branched Rna Analog, PDB code: 4pei
was solved by
E.J.Montemayor,
A.Katolik,
N.E.Clark,
A.B.Taylor,
J.P.Schuermann,
D.J.Combs,
R.Johnsson,
S.P.Holloway,
S.W.Stevens,
M.J.Damha,
P.J.Hart,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 46.37 / 1.95 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 73.037, 142.479, 214.665, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 18.4 / 22.9 |
Nickel Binding Sites:
The binding sites of Nickel atom in the DBR1 in Complex with Synthetic Branched Rna Analog
(pdb code 4pei). This binding sites where shown within
5.0 Angstroms radius around Nickel atom.
In total 5 binding sites of Nickel where determined in the DBR1 in Complex with Synthetic Branched Rna Analog, PDB code: 4pei:
Jump to Nickel binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Nickel where determined in the DBR1 in Complex with Synthetic Branched Rna Analog, PDB code: 4pei:
Jump to Nickel binding site number: 1; 2; 3; 4; 5;
Nickel binding site 1 out of 5 in 4pei
Go back to
Nickel Binding Sites List in 4pei
Nickel binding site 1 out
of 5 in the DBR1 in Complex with Synthetic Branched Rna Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Nickel with other atoms in the Ni binding
site number 1 of DBR1 in Complex with Synthetic Branched Rna Analog within 5.0Å range:
|
Nickel binding site 2 out of 5 in 4pei
Go back to
Nickel Binding Sites List in 4pei
Nickel binding site 2 out
of 5 in the DBR1 in Complex with Synthetic Branched Rna Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Nickel with other atoms in the Ni binding
site number 2 of DBR1 in Complex with Synthetic Branched Rna Analog within 5.0Å range:
|
Nickel binding site 3 out of 5 in 4pei
Go back to
Nickel Binding Sites List in 4pei
Nickel binding site 3 out
of 5 in the DBR1 in Complex with Synthetic Branched Rna Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Nickel with other atoms in the Ni binding
site number 3 of DBR1 in Complex with Synthetic Branched Rna Analog within 5.0Å range:
|
Nickel binding site 4 out of 5 in 4pei
Go back to
Nickel Binding Sites List in 4pei
Nickel binding site 4 out
of 5 in the DBR1 in Complex with Synthetic Branched Rna Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Nickel with other atoms in the Ni binding
site number 4 of DBR1 in Complex with Synthetic Branched Rna Analog within 5.0Å range:
|
Nickel binding site 5 out of 5 in 4pei
Go back to
Nickel Binding Sites List in 4pei
Nickel binding site 5 out
of 5 in the DBR1 in Complex with Synthetic Branched Rna Analog
Mono view
Stereo pair view
Mono view
Stereo pair view
|
|
A full contact list of Nickel with other atoms in the Ni binding
site number 5 of DBR1 in Complex with Synthetic Branched Rna Analog within 5.0Å range:
|
Reference:
E.J.Montemayor,
A.Katolik,
N.E.Clark,
A.B.Taylor,
J.P.Schuermann,
D.J.Combs,
R.Johnsson,
S.P.Holloway,
S.W.Stevens,
M.J.Damha,
P.J.Hart.
Structural Basis of Lariat Rna Recognition By the Intron Debranching Enzyme DBR1. Nucleic Acids Res. V. 42 10845 2014.
ISSN: ESSN 1362-4962
PubMed: 25123664
DOI: 10.1093/NAR/GKU725
Page generated: Wed Oct 9 19:09:35 2024
ISSN: ESSN 1362-4962
PubMed: 25123664
DOI: 10.1093/NAR/GKU725
Last articles
Mg in 3T2CMg in 3T2B
Mg in 3T1R
Mg in 3T1O
Mg in 3T0D
Mg in 3T1Q
Mg in 3T12
Mg in 3T1K
Mg in 3T10
Mg in 3T0Z