Nickel in PDB 5jig: Crytsal Structure of WSS1 From S. Pombe

The structure of Crytsal Structure of WSS1 From S. Pombe, PDB code: 5jig was solved by M.Groll, J.Stingele, S.Boulton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	40.300, 41.300, 68.500, 90.00, 90.00, 90.00
R / Rfree (%)	14.1 / 16.7

The binding sites of Nickel atom in the Crytsal Structure of WSS1 From S. Pombe (pdb code 5jig). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crytsal Structure of WSS1 From S. Pombe, PDB code: 5jig:

Nickel binding site 1 out of 1 in the Crytsal Structure of WSS1 From S. Pombe


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crytsal Structure of WSS1 From S. Pombe within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni201 b:8.2 occ:1.00 HE2 A:HIS97 1.2 7.4 1.0 HE2 A:HIS101 1.3 6.7 1.0 HE2 A:HIS107 1.3 8.4 1.0 NE2 A:HIS97 2.1 7.2 1.0 NE2 A:HIS101 2.1 7.4 1.0 NE2 A:HIS107 2.1 9.7 1.0 O A:HOH311 2.1 13.7 1.0 O1 A:OXY202 2.2 9.5 1.0 O A:HOH343 2.2 12.5 1.0 O2 A:OXY202 3.0 16.4 1.0 CE1 A:HIS107 3.0 14.2 1.0 CD2 A:HIS97 3.1 6.8 1.0 CE1 A:HIS101 3.1 7.8 1.0 CE1 A:HIS97 3.1 7.6 1.0 CD2 A:HIS101 3.1 7.0 1.0 CD2 A:HIS107 3.1 10.0 1.0 HE1 A:HIS107 3.2 12.7 1.0 HD2 A:HIS97 3.2 6.7 1.0 HE1 A:HIS101 3.2 7.5 1.0 HD2 A:HIS101 3.3 7.0 1.0 HE1 A:HIS97 3.3 7.1 1.0 HD2 A:HIS107 3.3 10.8 1.0 O A:HOH312 4.1 14.6 1.0 ND1 A:HIS107 4.1 14.2 1.0 ND1 A:HIS101 4.2 7.9 1.0 ND1 A:HIS97 4.2 7.2 1.0 CG A:HIS101 4.2 6.8 1.0 CG A:HIS97 4.2 6.1 1.0 CG A:HIS107 4.3 10.8 1.0 O A:HOH451 4.3 20.6 1.0 O A:HOH363 4.3 26.6 1.0 HZ A:PHE111 4.4 7.0 1.0 OE1 A:GLU98 4.4 8.1 1.0 HE1 A:PHE111 4.7 7.6 1.0 CZ A:PHE111 4.8 7.1 1.0 HD1 A:HIS107 4.9 13.2 1.0 CE1 A:PHE111 4.9 7.7 1.0 HD1 A:HIS97 5.0 6.9 1.0 HD1 A:HIS101 5.0 7.2 1.0

J.Stingele, R.Bellelli, F.Alte, G.Hewitt, G.Sarek, S.L.Maslen, S.E.Tsutakawa, A.Borg, S.Kjr, J.A.Tainer, J.M.Skehel, M.Groll, S.J.Boulton. Mechanism and Regulation of Dna-Protein Crosslink Repair By the Dna-Dependent Metalloprotease Sprtn. Mol.Cell V. 64 688 2016.
ISSN: ISSN 1097-2765
PubMed: 27871365
DOI: 10.1016/J.MOLCEL.2016.09.031