Nickel in PDB 5nzw: Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone

The structure of Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone, PDB code: 5nzw was solved by J.A.Newman, H.Aitkenhead, K.Kupinska, N.A.Burgess-Brown, R.Talon, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.50 / 2.70
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.356, 58.495, 112.538, 90.00, 90.00, 90.00
R / Rfree (%)	22.6 / 31.5

The binding sites of Nickel atom in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone (pdb code 5nzw). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone, PDB code: 5nzw:

Nickel binding site 1 out of 1 in the Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni1101 b:72.0 occ:1.00 O1 A:9F21102 1.9 66.2 1.0 ND1 A:HIS734 2.1 80.7 1.0 NE2 A:HIS732 2.1 72.3 1.0 NE2 A:HIS793 2.2 62.7 1.0 OD2 A:ASP815 2.3 80.2 1.0 O2 A:9F21102 2.4 69.3 1.0 C6 A:9F21102 2.7 74.9 1.0 CE1 A:HIS734 2.8 78.1 1.0 C7 A:9F21102 2.9 73.6 1.0 CD2 A:HIS732 3.0 71.1 1.0 CE1 A:HIS793 3.1 62.2 1.0 CE1 A:HIS732 3.2 80.8 1.0 CG A:HIS734 3.2 82.8 1.0 CG A:ASP815 3.3 80.2 1.0 CD2 A:HIS793 3.3 57.6 1.0 CB A:ASP815 3.5 71.4 1.0 CB A:HIS734 3.8 80.1 1.0 NE2 A:HIS734 4.0 75.9 1.0 N1 A:9F21102 4.0 81.5 1.0 NE2 A:HIS737 4.0 75.9 1.0 CG A:HIS732 4.2 73.5 1.0 CD2 A:HIS737 4.2 78.2 1.0 CD2 A:HIS734 4.2 86.0 1.0 ND1 A:HIS732 4.2 82.0 1.0 ND1 A:HIS793 4.3 58.0 1.0 N2 A:9F21102 4.3 78.9 1.0 CG A:HIS793 4.4 60.6 1.0 OD1 A:ASP815 4.4 87.2 1.0 NE2 A:HIS994 4.6 66.5 1.0 CE1 A:HIS994 4.8 66.1 1.0

J.A.Newman, H.Aitkenhead, K.Kupinska, N.A.Burgess-Brown, R.Talon, T.Krojer, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi. Crystal Structure of Dna Cross-Link Repair Protein 1A in Complex with Ceftriaxone To Be Published.