Nickel in PDB 6i98: Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State

The structure of Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State, PDB code: 6i98 was solved by I.Josts, H.Tidow, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	151.17 / 2.80
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	174.554, 174.554, 180.245, 90.00, 90.00, 120.00
R / Rfree (%)	21.3 / 26

The structure of Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Nickel atom in the Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State (pdb code 6i98). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total only one binding site of Nickel was determined in the Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State, PDB code: 6i98:

Nickel binding site 1 out of 1 in the Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Structure of the Ferrioxamine B Transporter Foxa From Pseudomonas Aeruginosa, Apo State within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni901 b:99.7 occ:1.00 OD2 A:ASP406 2.4 59.2 1.0 CE1 A:HIS367 2.5 57.0 1.0 OD1 A:ASP406 2.9 68.3 1.0 CG A:ASP406 3.0 58.6 1.0 NE2 A:HIS367 3.1 56.7 1.0 ND1 A:HIS367 3.6 58.7 1.0 CD2 A:HIS367 4.4 56.8 1.0 CB A:ASP406 4.5 52.5 1.0 OG1 A:THR408 4.5 58.3 1.0 CG A:HIS367 4.6 55.9 1.0

I.Josts, K.Veith, H.Tidow. Ternary Structure of the Outer Membrane Transporter Foxa with Resolved Signalling Domain Provides Insights Into Tonb-Mediated Siderophore Uptake. Elife V. 8 2019.
ISSN: ESSN 2050-084X
PubMed: 31385808
DOI: 10.7554/ELIFE.48528