Nickel in PDB 8anu: Crystal Structure of Protein PHI3T-93

The structure of Crystal Structure of Protein PHI3T-93, PDB code: 8anu was solved by S.Zamora-Caballero, A.Marina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.06 / 2.31
Space group	I 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	46.35, 49.91, 70.53, 90, 107.74, 90
R / Rfree (%)	20.9 / 26

The binding sites of Nickel atom in the Crystal Structure of Protein PHI3T-93 (pdb code 8anu). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of Protein PHI3T-93, PDB code: 8anu:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of Protein PHI3T-93


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of Protein PHI3T-93 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ni101 b:30.0 occ:0.50 O C:HOH204 2.4 30.0 1.0 ND1 C:HIS44 2.4 64.3 1.0 CG C:HIS44 3.3 63.1 1.0 CE1 C:HIS44 3.4 57.5 1.0 CB C:HIS44 3.5 40.7 1.0 CA C:HIS44 3.6 40.5 1.0 O C:ILE43 4.4 42.0 1.0 CD2 C:HIS44 4.5 65.3 1.0 NE2 C:HIS44 4.5 72.5 1.0 O C:HIS44 4.6 53.5 1.0 N C:HIS44 4.6 35.7 1.0 C C:HIS44 4.6 47.5 1.0 C C:ILE43 4.9 37.6 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of Protein PHI3T-93


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of Protein PHI3T-93 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni101 b:60.0 occ:0.50 ND1 A:HIS44 2.3 45.9 1.0 O A:HOH221 2.7 32.0 1.0 CE1 A:HIS44 3.2 41.8 1.0 CG A:HIS44 3.3 42.4 1.0 CB A:HIS44 3.6 37.7 1.0 CA A:HIS44 3.7 35.5 1.0 O A:ILE43 4.3 43.7 1.0 NE2 A:HIS44 4.3 41.2 1.0 CD2 A:HIS44 4.4 41.8 1.0 N A:HIS44 4.6 34.3 1.0 C A:HIS44 4.6 42.6 1.0 C A:ILE43 4.7 41.1 1.0 O A:HIS44 4.8 40.0 1.0

S.Zamora-Caballero, A.Marina. Antagonistic Interactions Between Phage and Host Factors Control Arbitrium Lysis-Lysogeny Decision Nat Microbiol 2023.
ISSN: ESSN 2058-5276