Nickel in PDB 8jbc: Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form

The structure of Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form, PDB code: 8jbc was solved by Z.Lin, L.Du, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.64 / 2.41
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	94.89, 205.57, 59.1, 90, 90, 90
R / Rfree (%)	22.2 / 26.9

The binding sites of Nickel atom in the Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form (pdb code 8jbc). This binding sites where shown within 5.0 Angstroms radius around Nickel atom.
In total 2 binding sites of Nickel where determined in the Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form, PDB code: 8jbc:
Jump to Nickel binding site number: 1; 2;

Nickel binding site 1 out of 2 in the Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 1 of Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Ni1001 b:122.4 occ:1.00 NE2 A:HIS310 2.2 87.2 1.0 CE1 A:HIS310 2.5 86.5 1.0 OE1 A:GLU314 2.6 93.6 1.0 OE1 A:GLU458 3.2 108.8 1.0 NH2 A:ARG241 3.5 78.0 1.0 CD2 A:HIS310 3.6 82.4 1.0 CD A:GLU314 3.7 95.4 1.0 ND1 A:HIS310 3.8 87.0 1.0 NH1 A:ARG241 3.9 75.1 1.0 CZ A:ARG241 4.0 82.2 1.0 CD A:GLU458 4.2 110.3 1.0 CG A:HIS310 4.3 80.1 1.0 OE2 A:GLU458 4.5 109.5 1.0 CG A:GLU314 4.5 83.3 1.0 OE2 A:GLU314 4.5 96.8 1.0

Nickel binding site 2 out of 2 in the Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form


Mono view


Stereo pair view

A full contact list of Nickel with other atoms in the Ni binding site number 2 of Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form within 5.0Å range: probe atom residue distance (Å) B Occ B:Ni1001 b:110.0 occ:1.00 OE2 B:GLU314 2.5 84.1 1.0 CE1 B:HIS310 2.6 76.2 1.0 OE2 B:GLU458 2.7 99.6 1.0 NE2 B:HIS310 2.7 80.1 1.0 CD B:GLU458 3.5 96.4 1.0 OE1 B:GLU458 3.5 96.8 1.0 CD B:GLU314 3.5 76.7 1.0 ND1 B:HIS310 3.8 74.4 1.0 CG B:GLU314 3.9 63.3 1.0 NH2 B:ARG241 4.0 75.3 1.0 CD2 B:HIS310 4.0 79.0 1.0 CG B:HIS310 4.6 73.4 1.0 OE1 B:GLU314 4.7 76.9 1.0 CZ B:ARG241 4.9 78.2 1.0 CG B:GLU458 4.9 85.8 1.0

Z.Lin, L.Du. Crystal Structure of the CSM6 K137A Mutant From Thermus Thermophilus HB8 in Its Apo Form To Be Published.